RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 GRPEL2Q8TAA5 225 aa11.8□□□□□ -0.52
HSPG2-211ENST00000486901 KAT2AQ92830 837 aa11.8□□□□□ -0.52
HSPG2-211ENST00000486901 KLK6Q92876 244 aa11.8□□□□□ -0.52
HSPG2-211ENST00000486901 EXOSC8Q96B26 276 aaKnown RBP11.8□□□□□ -0.52
HSPG2-211ENST00000486901 REPS1Q96D71 796 aa11.8□□□□□ -0.52
HSPG2-211ENST00000486901 SNX18Q96RF0 628 aa11.8□□□□□ -0.52
HSPG2-211ENST00000486901 SLC22A4Q9H015 551 aa11.8□□□□□ -0.52
HSPG2-211ENST00000486901 RNF121Q9H920 327 aa11.8□□□□□ -0.52
HSPG2-211ENST00000486901 CXXC1Q9P0U4 656 aaPredicted RBP11.8□□□□□ -0.52
HSPG2-211ENST00000486901 TRPC4Q9UBN4 977 aa11.8□□□□□ -0.52
HSPG2-211ENST00000486901 PADI2Q9Y2J8 665 aa11.8□□□□□ -0.52
HSPG2-211ENST00000486901 AP3M1Q9Y2T2 418 aa11.8□□□□□ -0.52
HSPG2-211ENST00000486901 CHD7Q9P2D1 2997 aa11.8□□□□□ -0.52
HSPG2-211ENST00000486901 NRG2O14511 850 aaPredicted RBP11.79□□□□□ -0.52
HSPG2-211ENST00000486901 SCAMP1O15126 338 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 PRKRAO75569 313 aaKnown RBP11.79□□□□□ -0.52
HSPG2-211ENST00000486901 SLC2A2P11168 524 aaPredicted RBP11.79□□□□□ -0.52
HSPG2-211ENST00000486901 ATP1B2P14415 290 aaPredicted RBP11.79□□□□□ -0.52
HSPG2-211ENST00000486901 RPS3P23396 243 aaKnown RBP eCLIP11.79□□□□□ -0.523e-7■■■□□ 18.8
HSPG2-211ENST00000486901 SERPINA4P29622 427 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 PPM1FP49593 454 aaPredicted RBP11.79□□□□□ -0.52
HSPG2-211ENST00000486901 SMSP52788 366 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 RBBP4Q09028 425 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 VEZF1Q14119 521 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 RETSATQ6NUM9 610 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 UNC5DQ6UXZ4 953 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 LINC00299Q6ZSB3 139 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 Q8N402 240 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 SMAP2Q8WU79 429 aaPredicted RBP11.79□□□□□ -0.52
HSPG2-211ENST00000486901 WRAP53Q9BUR4 548 aaKnown RBP11.79□□□□□ -0.52
HSPG2-211ENST00000486901 RIOK2Q9BVS4 552 aaKnown RBP11.79□□□□□ -0.52
HSPG2-211ENST00000486901 HDHD2Q9H0R4 259 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 EGLN3Q9H6Z9 239 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 TRIM45Q9H8W5 580 aaPredicted RBP11.79□□□□□ -0.52
HSPG2-211ENST00000486901 SEMA3GQ9NS98 782 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 TMEM45AQ9NWC5 275 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 PCDHB7Q9Y5E2 793 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 KLK4Q9Y5K2 254 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 FAM25AB3EWG3 89 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 FAM25CB3EWG5 89 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 FAM25GB3EWG6 89 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 HMGA1P17096 107 aaKnown RBP11.79□□□□□ -0.52
HSPG2-211ENST00000486901 SLC6A12P48065 614 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 SRP54P61011 504 aaKnown RBP11.79□□□□□ -0.52
HSPG2-211ENST00000486901 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.79□□□□□ -0.52
HSPG2-211ENST00000486901 ZNF284Q2VY69 593 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 FAM20CQ8IXL6 584 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 OR8J2Q8NGG1 315 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 KLHL6Q8WZ60 621 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 MRPS7Q9Y2R9 242 aaKnown RBP11.79□□□□□ -0.52
HSPG2-211ENST00000486901 A0A1W2PRB8 838 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 CIB4A0PJX0 185 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 HMX3A6NHT5 357 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 GTPBP1O00178 669 aaKnown RBP11.79□□□□□ -0.52
HSPG2-211ENST00000486901 PPM1DO15297 605 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 TOXO94900 526 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 MSL3P1P0C860 447 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 ITGA2P17301 1181 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 IL1RNP18510 177 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 SSTR2P30874 369 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 CSTF2P33240 577 aaKnown RBP eCLIP11.79□□□□□ -0.52
HSPG2-211ENST00000486901 GSTM5P46439 218 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 P2RX3P56373 397 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 SNAPC1Q16533 368 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 WSCD2Q2TBF2 565 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 KIAA1161Q6NSJ0 714 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 ACSM5Q6NUN0 579 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 CNIH2Q6PI25 160 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 HSD11B1LQ7Z5J1 315 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 FAM46DQ8NEK8 389 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 BEST4Q8NFU0 473 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 CYB5D2Q8WUJ1 264 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 ZFPM2Q8WW38 1151 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 TM9SF4Q92544 642 aa11.79□□□□□ -0.52
HSPG2-211ENST00000486901 C2orf49Q9BVC5 232 aaPredicted RBP11.79□□□□□ -0.52
HSPG2-211ENST00000486901 GPBP1L1Q9HC44 474 aaPredicted RBP11.79□□□□□ -0.52
HSPG2-211ENST00000486901 STOX2Q9P2F5 926 aaPredicted RBP11.79□□□□□ -0.52
HSPG2-211ENST00000486901 HEPACAM2A8MVW5 462 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 ZDHHC11BP0C7U3 371 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 PCGF2P35227 344 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 ZNF791Q3KP31 576 aaPredicted RBP11.78□□□□□ -0.52
HSPG2-211ENST00000486901 KRT74Q7RTS7 529 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 TMC8Q8IU68 726 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 HORMAD2Q8N7B1 307 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 L3MBTL4Q8NA19 623 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 WDR20Q8TBZ3 569 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 TMEM159Q96B96 161 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 TMEM80Q96HE8 168 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 SLC6A16Q9GZN6 736 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 ANKHQ9HCJ1 492 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 B3GAT2Q9NPZ5 323 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 PLCXD1Q9NUJ7 323 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 CFAP97Q9P2B7 532 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 SLC23A1Q9UHI7 598 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 VWA8A3KMH1 1905 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 A0A1W2PPK0 400 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 OR6C75A6NL08 312 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 OR2B3O76000 313 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 ATP6V1E1P36543 226 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 DDOSTP39656 456 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms