RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 MLF1P58340 268 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 DNAJB13P59910 316 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 FOLH1Q04609 750 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 BTKQ06187 659 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 MAPKAPK3Q16644 382 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 IMPG1Q17R60 797 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 KRT71Q3SY84 523 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 TCHHL1Q5QJ38 904 aaPredicted RBP11.67□□□□□ -0.54
PTCD1-205ENST00000485746 FHL5Q5TD97 284 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 SPINK14Q6IE38 97 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 MRM1Q6IN84 353 aaKnown RBP11.67□□□□□ -0.54
PTCD1-205ENST00000485746 RPUSD3Q6P087 351 aaKnown RBP11.67□□□□□ -0.54
PTCD1-205ENST00000485746 HSDL2Q6YN16 418 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 SH2D5Q6ZV89 423 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 LGI4Q8N135 537 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 METTL4Q8N3J2 472 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 TMEM178AQ8NBL3 297 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 FAM98AQ8NCA5 519 aaKnown RBP11.67□□□□□ -0.54
PTCD1-205ENST00000485746 PRR7Q8TB68 274 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 APOPT1Q96IL0 206 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 ART5Q96L15 291 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 NPAS2Q99743 824 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 PELOQ9BRX2 385 aaKnown RBP11.67□□□□□ -0.54
PTCD1-205ENST00000485746 OLAHQ9NV23 265 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 LRFN1Q9P244 771 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 ADAM29Q9UKF5 820 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 ASB4Q9Y574 426 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 TIMM22Q9Y584 194 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 BOD1L1Q8NFC6 3051 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 SMG1Q96Q15 3661 aaKnown RBP11.66□□□□□ -0.54
PTCD1-205ENST00000485746 ANKUB1A6NFN9 424 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 H3BQF6 201 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 RGS16O15492 202 aaPredicted RBP11.66□□□□□ -0.54
PTCD1-205ENST00000485746 SPAG7O75391 227 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 GPR75O95800 540 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 AIFM1O95831 613 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 STT3AP46977 705 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 SSR4P51571 173 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 CSTF3Q12996 717 aaKnown RBP11.66□□□□□ -0.54
PTCD1-205ENST00000485746 MRPL49Q13405 166 aaKnown RBP11.66□□□□□ -0.54
PTCD1-205ENST00000485746 INAQ16352 499 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 EIF2S3LQ2VIR3 472 aaKnown RBP11.66□□□□□ -0.54
PTCD1-205ENST00000485746 SPDYAQ5MJ70 313 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 LIPMQ5VYY2 423 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 OR52E8Q6IFG1 317 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 SLC25A25Q6KCM7 469 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 SCIMPQ6UWF3 145 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 COMMD6Q7Z4G1 85 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 TRABD2AQ86V40 505 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 C1orf52Q8N6N3 182 aaKnown RBP11.66□□□□□ -0.54
PTCD1-205ENST00000485746 GBP7Q8N8V2 638 aaPredicted RBP11.66□□□□□ -0.54
PTCD1-205ENST00000485746 APCDD1LQ8NCL9 501 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 OR4K14Q8NGD5 310 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 OR5L2Q8NGL0 311 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 SLC2A12Q8TD20 617 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 PTPMT1Q8WUK0 201 aaPredicted RBP11.66□□□□□ -0.54
PTCD1-205ENST00000485746 FAR1Q8WVX9 515 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 SIGLEC12Q96PQ1 595 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 KCNA7Q96RP8 456 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 CNPPD1Q9BV87 410 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 FAIM2Q9BWQ8 316 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 ZNF717Q9BY31 904 aaPredicted RBP11.66□□□□□ -0.54
PTCD1-205ENST00000485746 SHCBP1LQ9BZQ2 653 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 CENPHQ9H3R5 247 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 GSTO2Q9H4Y5 243 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 LIN28AQ9H9Z2 209 aaKnown RBP11.66□□□□□ -0.54
PTCD1-205ENST00000485746 PFDN4Q9NQP4 134 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.66□□□□□ -0.54
PTCD1-205ENST00000485746 OXSMQ9NWU1 459 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 LGALS13Q9UHV8 139 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 ZNF225Q9UK10 706 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 ERVK-11Q9UQG0 969 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 NTNG1Q9Y2I2 539 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 PLLPQ9Y342 182 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 CLDN16Q9Y5I7 305 aa11.66□□□□□ -0.54
PTCD1-205ENST00000485746 ZNF462Q96JM2 2506 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 GNG14A0A1W2PPG7 69 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 WASHC1A8K0Z3 465 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 WWP2O00308 870 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 CDK2AP1O14519 115 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 PGRMC2O15173 223 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 TRIM13O60858 407 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 ITGA10O75578 1167 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 ALDH9A1P49189 494 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 HLCSP50747 726 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 ACSM2AQ08AH3 577 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 ZNF267Q14586 743 aaPredicted RBP11.65□□□□□ -0.54
PTCD1-205ENST00000485746 NDUFAF5Q5TEU4 345 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 FAM219BQ5XKK7 198 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 ACSM2BQ68CK6 577 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 C10orf107Q8IVU9 208 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 ST13P4Q8IZP2 240 aaPredicted RBP11.65□□□□□ -0.54
PTCD1-205ENST00000485746 MREGQ8N565 214 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 BANPQ8N9N5 519 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 DNAJB8Q8NHS0 232 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 DOK4Q8TEW6 326 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 AGAP11Q8TF27 550 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 ASB15Q8WXK1 588 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 RIT1Q92963 219 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 SENP5Q96HI0 755 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms