RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 SIRT6Q8N6T7 355 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 FNDC5Q8NAU1 212 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 PLPP5Q8NEB5 264 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 FDCSPQ8NFU4 85 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 THAP4Q8WY91 577 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 TTC9Q92623 222 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 MARK4Q96L34 752 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 ARHGAP9Q9BRR9 750 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 SEMA4CQ9C0C4 833 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 AKTIPQ9H8T0 292 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 MCM8Q9UJA3 840 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 MRPS33Q9Y291 106 aaKnown RBP11.12□□□□□ -0.63
APTX-227ENST00000485479 SERTM1A2A2V5 107 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 PRKNO60260 465 aaPredicted RBP11.12□□□□□ -0.63
APTX-227ENST00000485479 PDGFAP04085 211 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 SDC1P18827 310 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 EFNA1P20827 205 aaPredicted RBP11.12□□□□□ -0.63
APTX-227ENST00000485479 FEN1P39748 380 aaKnown RBP11.12□□□□□ -0.63
APTX-227ENST00000485479 PGDP52209 483 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 HSD17B7P56937 341 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 ACTN3Q08043 901 aaPredicted RBP11.12□□□□□ -0.63
APTX-227ENST00000485479 ZNF763Q0D2J5 394 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 ATP6AP1LQ52LC2 224 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 C6orf136Q5SQH8 315 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 CLEC1AQ8NC01 280 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 DNAJB14Q8TBM8 379 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 APOBEC4Q8WW27 367 aaKnown RBP11.12□□□□□ -0.63
APTX-227ENST00000485479 CKAP2Q8WWK9 683 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 EXOSC8Q96B26 276 aaKnown RBP11.12□□□□□ -0.63
APTX-227ENST00000485479 THOC3Q96J01 351 aaKnown RBP11.12□□□□□ -0.63
APTX-227ENST00000485479 NUDT9Q9BW91 350 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 ZBTB20Q9HC78 741 aaPredicted RBP11.12□□□□□ -0.63
APTX-227ENST00000485479 MED4Q9NPJ6 270 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 ZNF71Q9NQZ8 489 aaPredicted RBP11.12□□□□□ -0.63
APTX-227ENST00000485479 ADAM29Q9UKF5 820 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 EXO1Q9UQ84 846 aaKnown RBP11.12□□□□□ -0.63
APTX-227ENST00000485479 LOC102723996A0A087X1L8 192 aa11.11□□□□□ -0.63
APTX-227ENST00000485479 TCP11X1B4DZS4 312 aa11.11□□□□□ -0.63
APTX-227ENST00000485479 CTNSO60931 367 aa11.11□□□□□ -0.63
APTX-227ENST00000485479 NME6O75414 186 aaPredicted RBP11.11□□□□□ -0.63
APTX-227ENST00000485479 ITGAMP11215 1152 aa11.11□□□□□ -0.63
APTX-227ENST00000485479 IL10P22301 178 aa11.11□□□□□ -0.63
APTX-227ENST00000485479 TLX1P31314 330 aaPredicted RBP11.11□□□□□ -0.63
APTX-227ENST00000485479 DIO3P55073 304 aa11.11□□□□□ -0.63
APTX-227ENST00000485479 NME5P56597 212 aa11.11□□□□□ -0.63
APTX-227ENST00000485479 SLC9B1Q4ZJI4 515 aa11.11□□□□□ -0.63
APTX-227ENST00000485479 CRTC2Q53ET0 693 aaPredicted RBP11.11□□□□□ -0.63
APTX-227ENST00000485479 B3GNTL1Q67FW5 361 aaPredicted RBP11.11□□□□□ -0.63
APTX-227ENST00000485479 NDUFAF7Q7L592 441 aa11.11□□□□□ -0.63
APTX-227ENST00000485479 TRIM42Q8IWZ5 723 aa11.11□□□□□ -0.63
APTX-227ENST00000485479 LIX1Q8N485 282 aa11.11□□□□□ -0.63
APTX-227ENST00000485479 EXD3Q8N9H8 876 aa11.11□□□□□ -0.63
APTX-227ENST00000485479 SIMC1Q8NDZ2 872 aa11.11□□□□□ -0.63
APTX-227ENST00000485479 ADCY4Q8NFM4 1077 aa11.11□□□□□ -0.63
APTX-227ENST00000485479 BRIX1Q8TDN6 353 aaKnown RBP11.11□□□□□ -0.63
APTX-227ENST00000485479 THAP3Q8WTV1 239 aaPredicted RBP11.11□□□□□ -0.63
APTX-227ENST00000485479 KLHL29Q96CT2 875 aa11.11□□□□□ -0.63
APTX-227ENST00000485479 BBC3Q96PG8 261 aaPredicted RBP11.11□□□□□ -0.63
APTX-227ENST00000485479 ANKRA2Q9H9E1 313 aa11.11□□□□□ -0.63
APTX-227ENST00000485479 LIN28AQ9H9Z2 209 aaKnown RBP11.11□□□□□ -0.63
APTX-227ENST00000485479 MS4A12Q9NXJ0 267 aa11.11□□□□□ -0.63
APTX-227ENST00000485479 HAO1Q9UJM8 370 aa11.11□□□□□ -0.63
APTX-227ENST00000485479 G3BP2Q9UN86 482 aaKnown RBP11.11□□□□□ -0.63
APTX-227ENST00000485479 IGSF10Q6WRI0 2623 aa11.11□□□□□ -0.63
APTX-227ENST00000485479 C9JVG2 144 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 SDHDO14521 159 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 KLF11O14901 512 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 MAN1A2O60476 641 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 BCKDHAP12694 445 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 ARFIP1P53367 373 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 ZNF33BQ06732 778 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 C2orf80Q0P641 193 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 LTB4RQ15722 352 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 IL23RQ5VWK5 629 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 TMEM198Q66K66 360 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 GALNT18Q6P9A2 607 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 C16orf47Q6ZP98 133 aaPredicted RBP11.1□□□□□ -0.63
APTX-227ENST00000485479 TMEM132CQ8N3T6 1108 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 GALNT16Q8N428 558 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 TMEM102Q8N9M5 508 aaPredicted RBP11.1□□□□□ -0.63
APTX-227ENST00000485479 RAB3IL1Q8TBN0 382 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 PIWIL2Q8TC59 973 aaKnown RBP11.1□□□□□ -0.63
APTX-227ENST00000485479 ABHD17AQ96GS6 310 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 LPAR4Q99677 370 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 EBF4Q9BQW3 602 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 OR8D2Q9GZM6 311 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 ZNF700Q9H0M5 742 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 WDR41Q9HAD4 459 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 CLK4Q9HAZ1 481 aaKnown RBP11.1□□□□□ -0.63
APTX-227ENST00000485479 GPR83Q9NYM4 423 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 PTGFRNQ9P2B2 879 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 UTS2RQ9UKP6 389 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 MMACHCQ9Y4U1 282 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 PCDHA9Q9Y5H5 950 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 C17orf105B2RV13 164 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 HPP00738 406 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 IGHEP01854 428 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 CT62P0C5K7 136 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 PRR35P0CG20 571 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 G6PDP11413 515 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms