RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 MOCS1Q9NZB8 636 aa12.02□□□□□ -0.49
HDAC6-227ENST00000485102 CTNNAL1Q9UBT7 734 aa12.02□□□□□ -0.49
HDAC6-227ENST00000485102 TRGV5A0A0B4J1U4 118 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 ATP6AP2A0A1C7CYW4 349 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 NPEPPSL1A6NEC2 478 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 HSPB2A8KAH6 182 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 C17orf105B2RV13 164 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 G3V3Y1 287 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 RAD51CO43502 376 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 PRAMEF4O60810 478 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 ATP6AP2O75787 350 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 SEC31AO94979 1220 aaKnown RBP12.01□□□□□ -0.49
HDAC6-227ENST00000485102 WISP3O95389 354 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-227ENST00000485102 SLU7O95391 586 aaKnown RBP12.01□□□□□ -0.49
HDAC6-227ENST00000485102 IGKV3-11P04433 115 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 CELA3AP09093 270 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 CCL3P10147 92 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 ENDOUP21128 410 aaKnown RBP12.01□□□□□ -0.49
HDAC6-227ENST00000485102 CERS1P27544 350 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 ELK3P41970 407 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 CASP2P42575 452 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 KIR2DL3P43628 341 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 DNASE1L1P49184 302 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 PPP2R2AP63151 447 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 CBLBQ13191 982 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 DAZAP2Q15038 168 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-227ENST00000485102 TSNQ15631 228 aaKnown RBP12.01□□□□□ -0.49
HDAC6-227ENST00000485102 TBCCQ15814 346 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 HSPB2Q16082 182 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 PRAMEF9Q5VWM5 478 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 SLC22A10Q63ZE4 541 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 CAMKMTQ7Z624 323 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 CLNKQ7Z7G1 428 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 LRRC25Q8N386 305 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-227ENST00000485102 FBXW8Q8N3Y1 598 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 ZNF321PQ8N8H1 164 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 FAM222BQ8WU58 562 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 ANKRD49Q8WVL7 239 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 CCT6BQ92526 530 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 PTCD3Q96EY7 689 aaKnown RBP12.01□□□□□ -0.49
HDAC6-227ENST00000485102 VPS39Q96JC1 886 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 WDR83Q9BRX9 315 aaKnown RBP12.01□□□□□ -0.49
HDAC6-227ENST00000485102 EFCAB11Q9BUY7 163 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 DERL2Q9GZP9 239 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 CLEC4MQ9H2X3 399 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-227ENST00000485102 LDAHQ9H6V9 325 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 CNOT10Q9H9A5 744 aaKnown RBP12.01□□□□□ -0.49
HDAC6-227ENST00000485102 COPS7BQ9H9Q2 264 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-227ENST00000485102 ZFP64Q9NPA5 681 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 SEMA4BQ9NPR2 832 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-227ENST00000485102 CNIH4Q9P003 139 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 COPS7AQ9UBW8 275 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 FOXD3Q9UJU5 478 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-227ENST00000485102 RPH3AQ9Y2J0 694 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-227ENST00000485102 PSAT1Q9Y617 370 aa12.01□□□□□ -0.49
HDAC6-227ENST00000485102 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.01□□□□□ -0.49
HDAC6-227ENST00000485102 FAM95CA0A1B0GW59 222 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 TAPBPO15533 448 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 PROM1O43490 865 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 ETHE1O95571 254 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 TNNI3P19429 210 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 DNASE1P24855 282 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 ATP5A1P25705 553 aaKnown RBP12□□□□□ -0.49
HDAC6-227ENST00000485102 CEACAM8P31997 349 aaPredicted RBP12□□□□□ -0.49
HDAC6-227ENST00000485102 PCDH1Q08174 1060 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 MGAT5Q09328 741 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 LAPTM5Q13571 262 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 C18orf21Q32NC0 220 aaPredicted RBP12□□□□□ -0.49
HDAC6-227ENST00000485102 LYPD8Q6UX82 237 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 SEM1Q6ZVN7 128 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 FRA10AC1Q70Z53 315 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 UBE3DQ7Z6J8 389 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 ZZZ3Q8IYH5 903 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 ACOT4Q8N9L9 421 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 ANKRD9Q96BM1 317 aaPredicted RBP12□□□□□ -0.49
HDAC6-227ENST00000485102 LRRC46Q96FV0 321 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 RMND5BQ96G75 393 aaPredicted RBP12□□□□□ -0.49
HDAC6-227ENST00000485102 SENP5Q96HI0 755 aaPredicted RBP12□□□□□ -0.49
HDAC6-227ENST00000485102 F2RL3Q96RI0 385 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 LIME1Q9H400 295 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 RHOJQ9H4E5 214 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 ZNF703Q9H7S9 590 aaPredicted RBP12□□□□□ -0.49
HDAC6-227ENST00000485102 PROK2Q9HC23 129 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 DNAJC11Q9NVH1 559 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 CRIM1Q9NZV1 1036 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 SPRR3Q9UBC9 169 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 ZNF629Q9UEG4 869 aaPredicted RBP12□□□□□ -0.49
HDAC6-227ENST00000485102 BOKQ9UMX3 212 aaPredicted RBP12□□□□□ -0.49
HDAC6-227ENST00000485102 IKBKGQ9Y6K9 419 aa12□□□□□ -0.49
HDAC6-227ENST00000485102 ANKRD33BA6NCL7 494 aa11.99□□□□□ -0.49
HDAC6-227ENST00000485102 A6NNC1 897 aa11.99□□□□□ -0.49
HDAC6-227ENST00000485102 AHRRA9YTQ3 701 aa11.99□□□□□ -0.49
HDAC6-227ENST00000485102 CLGNO14967 610 aa11.99□□□□□ -0.49
HDAC6-227ENST00000485102 LDB3O75112 727 aa11.99□□□□□ -0.49
HDAC6-227ENST00000485102 STK16O75716 305 aa11.99□□□□□ -0.49
HDAC6-227ENST00000485102 EPPINO95925 133 aa11.99□□□□□ -0.49
HDAC6-227ENST00000485102 GSTA2P09210 222 aa11.99□□□□□ -0.49
HDAC6-227ENST00000485102 COX7A2P14406 83 aa11.99□□□□□ -0.49
HDAC6-227ENST00000485102 CD22P20273 847 aa11.99□□□□□ -0.49
HDAC6-227ENST00000485102 HIST1H1TP22492 207 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms