RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 OR4C11Q6IEV9 310 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 LRIG3Q6UXM1 1119 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 CPEB2Q7Z5Q1 589 aaKnown RBP9.35□□□□□ -0.91
CPSF4-213ENST00000484112 CDH24Q86UP0 819 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 SPPL2CQ8IUH8 684 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 OR4F6Q8NGB9 312 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 OR5T3Q8NGG3 340 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 OR2W6PQ8NHA6 318 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 SREK1Q8WXA9 508 aaKnown RBP9.35□□□□□ -0.91
CPSF4-213ENST00000484112 TMEM237Q96Q45 408 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 F2RL3Q96RI0 385 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 LPAR4Q99677 370 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 TRMOQ9BU70 441 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 HES7Q9BYE0 225 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 AICDAQ9GZX7 198 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 RNF32Q9H0A6 362 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 STMN4Q9H169 189 aaPredicted RBP9.35□□□□□ -0.91
CPSF4-213ENST00000484112 DDX31Q9H8H2 851 aaKnown RBP9.35□□□□□ -0.91
CPSF4-213ENST00000484112 SEMA4BQ9NPR2 832 aaPredicted RBP9.35□□□□□ -0.91
CPSF4-213ENST00000484112 RYDENQ9NUL5 291 aaKnown RBP9.35□□□□□ -0.91
CPSF4-213ENST00000484112 PHF11Q9UIL8 331 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 EMCNQ9ULC0 261 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 NPIPA1Q9UND3 350 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 PLLPQ9Y342 182 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 ACTL7BQ9Y614 415 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 IGKV3D-11A0A0A0MRZ8 115 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 TCRBV16S1A1N1A0A5B0 115 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 ZNF860A6NHJ4 632 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 C4orf51C9J302 202 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 DYNC1I1O14576 645 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 RGS16O15492 202 aaPredicted RBP9.34□□□□□ -0.91
CPSF4-213ENST00000484112 CTIFO43310 598 aaKnown RBP9.34□□□□□ -0.91
CPSF4-213ENST00000484112 TGFB1P01137 390 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 MYZAPP0CAP1 466 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 CAPN3P20807 821 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 AGAP20933 346 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 PPP2R1BP30154 601 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 TLX1P31314 330 aaPredicted RBP9.34□□□□□ -0.91
CPSF4-213ENST00000484112 SERPINB5P36952 375 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 SSR2P43308 183 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 RPS13P62277 151 aaKnown RBP9.34□□□□□ -0.91
CPSF4-213ENST00000484112 ZNF844Q08AG5 666 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 GALNT1Q10472 559 aaPredicted RBP9.34□□□□□ -0.91
CPSF4-213ENST00000484112 CSTF3Q12996 717 aaKnown RBP9.34□□□□□ -0.91
CPSF4-213ENST00000484112 DDX39BQ13838 428 aaKnown RBP9.34□□□□□ -0.91
CPSF4-213ENST00000484112 RUNX2Q13950 521 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 SERTAD2Q14140 314 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 ABRAXAS2Q15018 415 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 BTBD16Q32M84 506 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 KRT71Q3SY84 523 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 CFAP157Q5JU67 520 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 SPINK14Q6IE38 97 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 C3P1Q6ZMU1 363 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 GPRIN3Q6ZVF9 776 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 PAGE2Q7Z2X7 111 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 UBE3DQ7Z6J8 389 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 ANKRD37Q7Z713 158 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 NUDT13Q86X67 352 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 SCUBE1Q8IWY4 988 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 C4orf33Q8N1A6 199 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 BEST3Q8N1M1 668 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 GBP7Q8N8V2 638 aaPredicted RBP9.34□□□□□ -0.91
CPSF4-213ENST00000484112 ACOT4Q8N9L9 421 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 CCDC63Q8NA47 563 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 M1APQ8TC57 530 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 TRPC4APQ8TEL6 797 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 PGM2Q96G03 612 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 IMMP1LQ96LU5 166 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 ZNF354BQ96LW1 612 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 GPR137Q96N19 417 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 NSUN5Q96P11 429 aaKnown RBP9.34□□□□□ -0.91
CPSF4-213ENST00000484112 MTERF1Q99551 399 aaKnown RBP9.34□□□□□ -0.91
CPSF4-213ENST00000484112 KCNK13Q9HB14 408 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 PRM3Q9NNZ6 103 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 LYARQ9NX58 379 aaKnown RBP9.34□□□□□ -0.91
CPSF4-213ENST00000484112 MEMO1Q9Y316 297 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 PKDREJQ9NTG1 2253 aa9.34□□□□□ -0.91
CPSF4-213ENST00000484112 UQCRHLA0A096LP55 91 aa9.33□□□□□ -0.92
CPSF4-213ENST00000484112 CYR61O00622 381 aa9.33□□□□□ -0.92
CPSF4-213ENST00000484112 PLPP1O14494 284 aa9.33□□□□□ -0.92
CPSF4-213ENST00000484112 TRIM13O60858 407 aa9.33□□□□□ -0.92
CPSF4-213ENST00000484112 B4GALT2O60909 372 aa9.33□□□□□ -0.92
CPSF4-213ENST00000484112 CTNSO60931 367 aa9.33□□□□□ -0.92
CPSF4-213ENST00000484112 GUCY1B2O75343 617 aa9.33□□□□□ -0.92
CPSF4-213ENST00000484112 ULK1O75385 1050 aa9.33□□□□□ -0.92
CPSF4-213ENST00000484112 SNUPNO95149 360 aaKnown RBP9.33□□□□□ -0.92
CPSF4-213ENST00000484112 ABOP16442 354 aa9.33□□□□□ -0.92
CPSF4-213ENST00000484112 CERS1P27544 350 aa9.33□□□□□ -0.92
CPSF4-213ENST00000484112 BUD31P41223 144 aaPredicted RBP9.33□□□□□ -0.92
CPSF4-213ENST00000484112 GSTM5P46439 218 aa9.33□□□□□ -0.92
CPSF4-213ENST00000484112 EFNA3P52797 238 aa9.33□□□□□ -0.92
CPSF4-213ENST00000484112 CDH13P55290 713 aa9.33□□□□□ -0.92
CPSF4-213ENST00000484112 OLR1P78380 273 aa9.33□□□□□ -0.92
CPSF4-213ENST00000484112 HSF1Q00613 529 aa9.33□□□□□ -0.92
CPSF4-213ENST00000484112 OC90Q02509 493 aaPredicted RBP9.33□□□□□ -0.92
CPSF4-213ENST00000484112 ACTN3Q08043 901 aaPredicted RBP9.33□□□□□ -0.92
CPSF4-213ENST00000484112 TUBA3CQ13748 450 aa9.33□□□□□ -0.92
CPSF4-213ENST00000484112 TESK1Q15569 626 aa9.33□□□□□ -0.92
CPSF4-213ENST00000484112 OR1C1Q15619 314 aa9.33□□□□□ -0.92
CPSF4-213ENST00000484112 KRTCAP3Q53RY4 240 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms