RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 SFXN5Q8TD22 340 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 RSC1A1Q92681 617 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 CNRIP1Q96F85 164 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-225ENST00000483495 SHDQ96IW2 340 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 MUS81Q96NY9 551 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 BARD1Q99728 777 aaKnown RBP12.53□□□□□ -0.4
CPNE1-225ENST00000483495 REEP1Q9H902 201 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 NDUFAF4Q9P032 175 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 FBXW2Q9UKT8 454 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 COLQQ9Y215 455 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-225ENST00000483495 ZNF451Q9Y4E5 1061 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 FANCMQ8IYD8 2048 aa12.52□□□□□ -0.4
CPNE1-225ENST00000483495 A0A1W2PR77 199 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 EME2A4GXA9 379 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-225ENST00000483495 WASHC1A8K0Z3 465 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 HMGN4O00479 90 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 SLC16A6O15403 523 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 HS6ST1O60243 411 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 DIRAS1O95057 198 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 OPN1SWP03999 348 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 ZNF888P0CJ79 500 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-225ENST00000483495 ITGAMP11215 1152 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 IL9P15248 144 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 LSSP48449 732 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 NCBP2P52298 156 aaKnown RBP eCLIP12.52□□□□□ -0.41
CPNE1-225ENST00000483495 RPS26P62854 115 aaKnown RBP12.52□□□□□ -0.41
CPNE1-225ENST00000483495 BTN3A2P78410 334 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 KCNAB2Q13303 367 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 C18orf63Q68DL7 685 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 KDM4DQ6B0I6 523 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 TNFAIP8L2Q6P589 184 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-225ENST00000483495 RNF44Q7L0R7 432 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 IQCHQ86VS3 1027 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 ARMC8Q8IUR7 673 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 BAHD1Q8TBE0 780 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-225ENST00000483495 SLC38A5Q8WUX1 472 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 BBS4Q96RK4 519 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 ZNF347Q96SE7 839 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 NELL2Q99435 816 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 ZFYVE21Q9BQ24 234 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 LRRC61Q9BV99 259 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 SERHL2Q9H4I8 314 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 PRDM9Q9NQV7 894 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 EVA1BQ9NVM1 165 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 SAMHD1Q9Y3Z3 626 aaKnown RBP12.52□□□□□ -0.41
CPNE1-225ENST00000483495 PCDHGB3Q9Y5G1 929 aa12.52□□□□□ -0.41
CPNE1-225ENST00000483495 A0A0J9YY10 115 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 URADA6NGE7 173 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 PRAMEF25A6NGN4 478 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 GLOD5A6NK44 160 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 P2RX6O15547 441 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 BMP10O95393 424 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 C9P02748 559 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 CSF2P04141 144 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 WNT1P04628 370 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 JUNDP17535 347 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 PIGAP37287 484 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 DAPP51397 102 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 SUZ12Q15022 739 aaKnown RBP12.51□□□□□ -0.41
CPNE1-225ENST00000483495 MAPK11Q15759 364 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 THAP5Q7Z6K1 395 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 CYP4Z1Q86W10 505 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 CAMKVQ8NCB2 501 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 ZNF555Q8NEP9 628 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 SPPL2AQ8TCT8 520 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 ADAMTS16Q8TE57 1224 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 ZDHHC1Q8WTX9 485 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 GEMIN6Q8WXD5 167 aaKnown RBP12.51□□□□□ -0.41
CPNE1-225ENST00000483495 KLHL6Q8WZ60 621 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 ZNF681Q96N22 645 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 SERINC2Q96SA4 455 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 MAPKAP1Q9BPZ7 522 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 FOXQ1Q9C009 403 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 SEMA3GQ9NS98 782 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 HRASLS2Q9NWW9 162 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 KCMF1Q9P0J7 381 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 ENTPD4Q9Y227 616 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 ORC6Q9Y5N6 252 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 A0A087WXM4 84 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 A0A0J9YVX5 310 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 OR5K3A6NET4 321 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 AXIN1O15169 862 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 ADAMDEC1O15204 470 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 KIF1CO43896 1103 aaKnown RBP12.51□□□□□ -0.41
CPNE1-225ENST00000483495 NDUFS2O75306 463 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 JRKO75564 520 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 ITGA2P17301 1181 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 CSNK2A2P19784 350 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-225ENST00000483495 IGFBP5P24593 272 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 GPC1P35052 558 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 ALDH3B2P48448 385 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 SNRPNP63162 240 aaKnown RBP12.51□□□□□ -0.41
CPNE1-225ENST00000483495 HHEXQ03014 270 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 IL18R1Q13478 541 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 C1orf61Q13536 156 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 PUS10Q3MIT2 529 aaKnown RBP12.51□□□□□ -0.41
CPNE1-225ENST00000483495 NADK2Q4G0N4 442 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 MANEAQ5SRI9 462 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 FAHD1Q6P587 224 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 BHLHB9Q6PI77 547 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms