RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 FBXL16Q8N461 479 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 EXD3Q8N9H8 876 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 COLGALT1Q8NBJ5 622 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 OR52N4Q8NGI2 321 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 RPL3LQ92901 407 aaKnown RBP3.86□□□□□ -1.79
VPS41-212ENST00000482217 DAZLQ92904 295 aaKnown RBP3.86□□□□□ -1.79
VPS41-212ENST00000482217 MAP4K1Q92918 833 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 TM4SF19Q96DZ7 209 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 TMA16Q96EY4 203 aaKnown RBP3.86□□□□□ -1.79
VPS41-212ENST00000482217 SERAC1Q96JX3 654 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 EGLN2Q96KS0 407 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 LURAP1Q96LR2 239 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 ZNF48Q96MX3 618 aaPredicted RBP3.86□□□□□ -1.79
VPS41-212ENST00000482217 CASD1Q96PB1 797 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 FCRL5Q96RD9 977 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 FEVQ99581 238 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 SEPT5Q99719 369 aaPredicted RBP3.86□□□□□ -1.79
VPS41-212ENST00000482217 CIB1Q99828 191 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 ATG101Q9BSB4 218 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 LRRC1Q9BTT6 524 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 TRIM9Q9C026 710 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 CUEDC2Q9H467 287 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 SGK2Q9HBY8 427 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 NT5MQ9NPB1 228 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 CCNB1IP1Q9NPC3 277 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 FAM207AQ9NSI2 230 aaPredicted RBP3.86□□□□□ -1.79
VPS41-212ENST00000482217 OSER1Q9NX31 292 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 RBAKQ9NYW8 714 aaPredicted RBP3.86□□□□□ -1.79
VPS41-212ENST00000482217 RNF14Q9UBS8 474 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 COPS7AQ9UBW8 275 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 ADAM28Q9UKQ2 775 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 FOXJ3Q9UPW0 622 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 TNNQ9UQP3 1299 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 AAR2Q9Y312 384 aaKnown RBP3.86□□□□□ -1.79
VPS41-212ENST00000482217 KLK4Q9Y5K2 254 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 KLF2Q9Y5W3 355 aaPredicted RBP3.86□□□□□ -1.79
VPS41-212ENST00000482217 SLCO1B1Q9Y6L6 691 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 ROCK1Q13464 1354 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 BCLAF3A2AJT9 711 aaKnown RBP3.85□□□□□ -1.79
VPS41-212ENST00000482217 FBLL1A6NHQ2 334 aaKnown RBP3.85□□□□□ -1.79
VPS41-212ENST00000482217 CBY3A6NI87 242 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 WASHC1A8K0Z3 465 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 A8MXQ7 604 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 SMLR1H3BR10 107 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 CLDN4O14493 209 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 DSCR3O14972 297 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 PSMD3O43242 534 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 GPC4O75487 556 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 STX11O75558 287 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 NSA2O95478 260 aaKnown RBP3.85□□□□□ -1.79
VPS41-212ENST00000482217 LATS1O95835 1130 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 PIGRP01833 764 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 CD3GP09693 182 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 PNMA6AP0CW24 399 aaPredicted RBP3.85□□□□□ -1.79
VPS41-212ENST00000482217 RRASP10301 218 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 FGF5P12034 268 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 ZNF182P17025 639 aaPredicted RBP3.85□□□□□ -1.79
VPS41-212ENST00000482217 HOXB9P17482 250 aaPredicted RBP3.85□□□□□ -1.79
VPS41-212ENST00000482217 MAGP20916 626 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 CMA1P23946 247 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 CERS1P27544 350 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 PIK3R1P27986 724 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 HTR2AP28223 471 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 IL12BP29460 328 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 MARCKSP29966 332 aaPredicted RBP3.85□□□□□ -1.79
VPS41-212ENST00000482217 HNRNPH3P31942 346 aaKnown RBP3.85□□□□□ -1.79
VPS41-212ENST00000482217 HMGCLP35914 325 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 OR3A1P47881 315 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 SOX2P48431 317 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 CSNK1DP48730 415 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 FMO5P49326 533 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 ACADVLP49748 655 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 RGS7P49802 495 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 RAB9AP51151 201 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 TPMTP51580 245 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 CCNG1P51959 295 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 C21orf59P57076 290 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 ACTBP60709 375 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 RAB14P61106 215 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 ACTA2P62736 377 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 ACTG1P63261 375 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 ACTG2P63267 376 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 ACTC1P68032 377 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 ACTA1P68133 377 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 SIRPAP78324 504 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 GLO1Q04760 184 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 ARHGAP1Q07960 439 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 CYP24A1Q07973 514 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 PMPCAQ10713 525 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 SMARCB1Q12824 385 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 NAE1Q13564 534 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 DGCR6Q14129 220 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 HEPACAMQ14CZ8 416 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 P2RY14Q15391 338 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 USF2Q15853 346 aaPredicted RBP3.85□□□□□ -1.79
VPS41-212ENST00000482217 FAM189A2Q15884 450 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 EPHA10Q5JZY3 1008 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 NKAIN2Q5VXU1 208 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 MFSD14CQ5VZR4 134 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 DHRS13Q6UX07 377 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms