RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 VEZF1Q14119 521 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 CBLL1Q75N03 491 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 NRROSQ86YC3 692 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 VPS37AQ8NEZ2 397 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 OR2L8Q8NGY9 312 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 OR8K5Q8NH50 307 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 FAR1Q8WVX9 515 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 WDR92Q96MX6 357 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 GPR174Q9BXC1 333 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 DUSP21Q9H596 190 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 C8orf33Q9H7E9 229 aaPredicted RBP13.72□□□□□ -0.21
CHD3-211ENST00000481999 CXorf36Q9H7Y0 433 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 SPATA7Q9P0W8 599 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 BTNL2Q9UIR0 455 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 GMPPBQ9Y5P6 360 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 PRICKLE3O43900 615 aaPredicted RBP13.72□□□□□ -0.21
CHD3-211ENST00000481999 CYP4B1P13584 511 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 CLK3P49761 638 aaKnown RBP13.72□□□□□ -0.21
CHD3-211ENST00000481999 IL1RL1Q01638 556 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 HYAL2Q12891 473 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 C1orf61Q13536 156 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 NR1D2Q14995 579 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 CTF1Q16619 201 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 DCDC5Q6ZRR9 648 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 B3GNT8Q7Z7M8 397 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 ZBTB46Q86UZ6 589 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.72□□□□□ -0.21
CHD3-211ENST00000481999 OR10G6Q8NH81 332 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 LCN9Q8WX39 176 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 UBE2E3Q969T4 207 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 HSH2DQ96JZ2 352 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 SPATA9Q9BWV2 254 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 UBE2ZQ9H832 354 aaPredicted RBP13.72□□□□□ -0.21
CHD3-211ENST00000481999 PELI2Q9HAT8 420 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 PDP1Q9P0J1 537 aaPredicted RBP13.72□□□□□ -0.21
CHD3-211ENST00000481999 SAMHD1Q9Y3Z3 626 aaKnown RBP13.72□□□□□ -0.21
CHD3-211ENST00000481999 A0A1W2PRB8 838 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 LRIT2A6NDA9 550 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 TMEM229AB2RXF0 380 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 J3QRK9 145 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 GABARAPO95166 117 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 FKBP9O95302 570 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 MLLT10P55197 1068 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 SRP54P61011 504 aaKnown RBP13.71□□□□□ -0.21
CHD3-211ENST00000481999 SLC35A2P78381 396 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 PHEXP78562 749 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 OCA2Q04671 838 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 EOGTQ5NDL2 527 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 PIWIL3Q7Z3Z3 882 aaKnown RBP13.71□□□□□ -0.21
CHD3-211ENST00000481999 SYNPOQ8N3V7 929 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 TTC29Q8NA56 475 aaPredicted RBP13.71□□□□□ -0.21
CHD3-211ENST00000481999 CHPT1Q8WUD6 406 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 BHLHE41Q9C0J9 482 aaPredicted RBP13.71□□□□□ -0.21
CHD3-211ENST00000481999 REEP1Q9H902 201 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 RMI1Q9H9A7 625 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 ANKRA2Q9H9E1 313 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 TRPV5Q9NQA5 729 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 KIF17Q9P2E2 1029 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 ERVK-18Q9QC07 812 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 SCML1Q9UN30 329 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 MAPRE3Q9UPY8 281 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 ERI3O43414 337 aaKnown RBP13.71□□□□□ -0.21
CHD3-211ENST00000481999 GPR37L1O60883 481 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 B4GALT2O60909 372 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 OCM2P0CE71 109 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 OCMP0CE72 109 aaPredicted RBP13.71□□□□□ -0.21
CHD3-211ENST00000481999 FMO3P31513 532 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 OR1E2P47887 323 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 ITGA1P56199 1179 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 PPP1CAP62136 330 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 NPTX1Q15818 432 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 LINC00299Q6ZSB3 139 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 OLIG3Q7RTU3 272 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 TSPYL5Q86VY4 417 aaPredicted RBP13.71□□□□□ -0.21
CHD3-211ENST00000481999 AMIGO1Q86WK6 493 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 PARP8Q8N3A8 854 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 KCT2Q8NC54 265 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 MAFAQ8NHW3 353 aaPredicted RBP13.71□□□□□ -0.21
CHD3-211ENST00000481999 ZNF347Q96SE7 839 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 CCNB1IP1Q9NPC3 277 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 NDRG4Q9ULP0 352 aaKnown RBP13.71□□□□□ -0.21
CHD3-211ENST00000481999 CORO2BQ9UQ03 480 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 CORINQ9Y5Q5 1042 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 AP1M2Q9Y6Q5 423 aa13.71□□□□□ -0.21
CHD3-211ENST00000481999 SLC22A1O15245 554 aa13.7□□□□□ -0.22
CHD3-211ENST00000481999 SH3BP5O60239 455 aa13.7□□□□□ -0.22
CHD3-211ENST00000481999 DPM1O60762 260 aa13.7□□□□□ -0.22
CHD3-211ENST00000481999 MRPS14O60783 128 aaKnown RBP13.7□□□□□ -0.22
CHD3-211ENST00000481999 CHRM5P08912 532 aaPredicted RBP13.7□□□□□ -0.22
CHD3-211ENST00000481999 MAGP20916 626 aa13.7□□□□□ -0.22
CHD3-211ENST00000481999 PPIBP23284 216 aaKnown RBP13.7□□□□□ -0.22
CHD3-211ENST00000481999 SSR2P43308 183 aa13.7□□□□□ -0.22
CHD3-211ENST00000481999 RGS21Q2M5E4 152 aa13.7□□□□□ -0.22
CHD3-211ENST00000481999 ANXA8L1Q5VT79 327 aa13.7□□□□□ -0.22
CHD3-211ENST00000481999 TNFAIP8L2Q6P589 184 aaPredicted RBP13.7□□□□□ -0.22
CHD3-211ENST00000481999 SZRD1Q7Z422 152 aa13.7□□□□□ -0.22
CHD3-211ENST00000481999 TRIM69Q86WT6 500 aa13.7□□□□□ -0.22
CHD3-211ENST00000481999 SLC44A2Q8IWA5 706 aaPredicted RBP13.7□□□□□ -0.22
CHD3-211ENST00000481999 ATG16L2Q8NAA4 619 aa13.7□□□□□ -0.22
CHD3-211ENST00000481999 FBRSQ9HAH7 460 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms