RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 ZNF222Q9UK12 451 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 PCDHB14Q9Y5E9 798 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 AP1M2Q9Y6Q5 423 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 IQCMA0A1B0GVH7 501 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 IL33O95760 270 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 MTHFD1P11586 935 aaKnown RBP9.07□□□□□ -0.96
GARNL3-216ENST00000481242 RORCP51449 518 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 EIF5AP63241 154 aaKnown RBP9.07□□□□□ -0.96
GARNL3-216ENST00000481242 MOGSQ13724 837 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 ARFRP1Q13795 201 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 VMACQ2NL98 169 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 GFOD2Q3B7J2 385 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 ALG1LQ6GMV1 187 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 ERMP1Q7Z2K6 904 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 RPLP0P6Q8NHW5 317 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 TM9SF4Q92544 642 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 MND1Q9BWT6 205 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 MCOLN1Q9GZU1 580 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 RDH14Q9HBH5 336 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 UBR2Q8IWV8 1755 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 ALS2Q96Q42 1657 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.07□□□□□ -0.96
GARNL3-216ENST00000481242 NPIPA2E9PIF3 369 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 NPIPA3F8WFD2 350 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 CCRL2O00421 344 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 FAAHO00519 579 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 ALDOAP04075 364 aaKnown RBP9.07□□□□□ -0.96
GARNL3-216ENST00000481242 DBIP07108 87 aaKnown RBP9.07□□□□□ -0.96
GARNL3-216ENST00000481242 FGF3P11487 239 aaPredicted RBP9.07□□□□□ -0.96
GARNL3-216ENST00000481242 NELFEP18615 380 aaKnown RBP9.07□□□□□ -0.96
GARNL3-216ENST00000481242 ECHS1P30084 290 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 NFE2L1Q14494 772 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 PCBP2Q15366 365 aaKnown RBP eCLIP9.07□□□□□ -0.96
GARNL3-216ENST00000481242 CLPPQ16740 277 aaPredicted RBP9.07□□□□□ -0.96
GARNL3-216ENST00000481242 TTLL10Q6ZVT0 673 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 SPARTQ8N0X7 666 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 FTMTQ8N4E7 242 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 NPWQ8N729 165 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 CHST14Q8NCH0 376 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 OR4K1Q8NGD4 311 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 OR56A3Q8NH54 315 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 RHBDD1Q8TEB9 315 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 DTD2Q96FN9 168 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 EVA1AQ9H8M9 152 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 AIG1Q9NVV5 245 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 OAZ3Q9UMX2 235 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 TP73O15350 636 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 PEPDP12955 493 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 XRCC1P18887 633 aaPredicted RBP9.07□□□□□ -0.96
GARNL3-216ENST00000481242 ACSL1P33121 698 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 TRIM23P36406 574 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 GAS6Q14393 721 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 UNC50Q53HI1 259 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 CLEC12AQ5QGZ9 265 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 ABHD17BQ5VST6 288 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 GRHL2Q6ISB3 625 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 HACD2Q6Y1H2 254 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 USP53Q70EK8 1073 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 SATL1Q86VE3 508 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 IGDCC3Q8IVU1 814 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 YIPF7Q8N8F6 280 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 ZNF784Q8NCA9 323 aaPredicted RBP9.07□□□□□ -0.96
GARNL3-216ENST00000481242 SHKBP1Q8TBC3 707 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 ORAI3Q9BRQ5 295 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 ARNT2Q9HBZ2 717 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 GRIP1Q9Y3R0 1128 aa9.07□□□□□ -0.96
GARNL3-216ENST00000481242 NUP98P52948 1817 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 A0A0G2JPF8 293 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 HNRNPCL3B7ZW38 293 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 SOCS7O14512 581 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 KHNYNO15037 678 aaKnown RBP9.06□□□□□ -0.96
GARNL3-216ENST00000481242 PDYNP01213 254 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 HNRNPCL4P0DMR1 293 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 ATF6P18850 670 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 HTR1EP28566 365 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 CD6P30203 668 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 AGTR2P50052 363 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 ACTC1P68032 377 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 ACTA1P68133 377 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 RCAN2Q14206 197 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 TIGD6Q17RP2 521 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 LCTLQ6UWM7 567 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 ZNF598Q86UK7 904 aaKnown RBP9.06□□□□□ -0.96
GARNL3-216ENST00000481242 SLC15A3Q8IY34 581 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 ASCC1Q8N9N2 400 aaKnown RBP9.06□□□□□ -0.96
GARNL3-216ENST00000481242 AQP11Q8NBQ7 271 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 CCDC107Q8WV48 283 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 DNAJA4Q8WW22 397 aaPredicted RBP9.06□□□□□ -0.96
GARNL3-216ENST00000481242 SERINC2Q96SA4 455 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 POLDIP3Q9BY77 421 aaKnown RBP9.06□□□□□ -0.96
GARNL3-216ENST00000481242 TXLNGYQ9BZA5 131 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 MKLN1Q9UL63 735 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 MGAT4AQ9UM21 535 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 RBMX2Q9Y388 322 aaKnown RBP9.06□□□□□ -0.96
GARNL3-216ENST00000481242 EXOSC1Q9Y3B2 195 aaKnown RBP9.06□□□□□ -0.96
GARNL3-216ENST00000481242 GON4LQ3T8J9 2241 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 SDK1Q7Z5N4 2213 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 ZNF860A6NHJ4 632 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 VSTM2BA6NLU5 285 aa9.06□□□□□ -0.96
GARNL3-216ENST00000481242 BLOC1S5-TXNDC5H3BN57 136 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms