RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ADNPQ9H2P0 1102 aa18.49■□□□□ 0.55
LIME1-205ENST00000480139 ZNF160Q9HCG1 818 aa18.49■□□□□ 0.55
LIME1-205ENST00000480139 MYNNQ9NPC7 610 aa18.49■□□□□ 0.55
LIME1-205ENST00000480139 ADAP2Q9NPF8 381 aa18.49■□□□□ 0.55
LIME1-205ENST00000480139 TUBD1Q9UJT1 453 aa18.49■□□□□ 0.55
LIME1-205ENST00000480139 MED13Q9UHV7 2174 aa18.48■□□□□ 0.55
LIME1-205ENST00000480139 SAGE2PA6NJ88 616 aa18.48■□□□□ 0.55
LIME1-205ENST00000480139 HDAC3O15379 428 aa18.48■□□□□ 0.55
LIME1-205ENST00000480139 KLHL41O60662 606 aa18.48■□□□□ 0.55
LIME1-205ENST00000480139 SEC24DO94855 1032 aaPredicted RBP18.48■□□□□ 0.55
LIME1-205ENST00000480139 GPR75O95800 540 aa18.48■□□□□ 0.55
LIME1-205ENST00000480139 MAPK1P28482 360 aa18.48■□□□□ 0.55
LIME1-205ENST00000480139 RPL38P63173 70 aaKnown RBP18.48■□□□□ 0.55
LIME1-205ENST00000480139 FOLH1Q04609 750 aa18.48■□□□□ 0.55
LIME1-205ENST00000480139 ACTN3Q08043 901 aaPredicted RBP18.48■□□□□ 0.55
LIME1-205ENST00000480139 CHAF1BQ13112 559 aa18.48■□□□□ 0.55
LIME1-205ENST00000480139 HEPACAMQ14CZ8 416 aa18.48■□□□□ 0.55
LIME1-205ENST00000480139 GALNTL6Q49A17 601 aa18.48■□□□□ 0.55
LIME1-205ENST00000480139 C6orf136Q5SQH8 315 aa18.48■□□□□ 0.55
LIME1-205ENST00000480139 PAPD4Q6PIY7 484 aaKnown RBP18.48■□□□□ 0.55
LIME1-205ENST00000480139 KBTBD2Q8IY47 623 aa18.48■□□□□ 0.55
LIME1-205ENST00000480139 GALNT16Q8N428 558 aa18.48■□□□□ 0.55
LIME1-205ENST00000480139 PIWIL2Q8TC59 973 aaKnown RBP18.48■□□□□ 0.55
LIME1-205ENST00000480139 PELOQ9BRX2 385 aaKnown RBP18.48■□□□□ 0.55
LIME1-205ENST00000480139 MEAF6Q9HAF1 191 aa18.48■□□□□ 0.55
LIME1-205ENST00000480139 EHD3Q9NZN3 535 aa18.48■□□□□ 0.55
LIME1-205ENST00000480139 CES1P1Q9UKY3 287 aa18.48■□□□□ 0.55
LIME1-205ENST00000480139 DLGAP4Q9Y2H0 992 aa18.48■□□□□ 0.55
LIME1-205ENST00000480139 POLR3HQ9Y535 204 aaPredicted RBP18.48■□□□□ 0.55
LIME1-205ENST00000480139 PCDHGA9Q9Y5G4 932 aaKnown RBP18.48■□□□□ 0.55
LIME1-205ENST00000480139 IGHV3-20A0A0C4DH32 117 aa18.47■□□□□ 0.55
LIME1-205ENST00000480139 ATP6AP2A0A1C7CYW4 349 aa18.47■□□□□ 0.55
LIME1-205ENST00000480139 GLOD5A6NK44 160 aa18.47■□□□□ 0.55
LIME1-205ENST00000480139 PGRMC2O15173 223 aa18.47■□□□□ 0.55
LIME1-205ENST00000480139 VPS4BO75351 444 aa18.47■□□□□ 0.55
LIME1-205ENST00000480139 ATP6AP2O75787 350 aa18.47■□□□□ 0.55
LIME1-205ENST00000480139 SERPINA7P05543 415 aa18.47■□□□□ 0.55
LIME1-205ENST00000480139 IL3P08700 152 aa18.47■□□□□ 0.55
LIME1-205ENST00000480139 PRR35P0CG20 571 aa18.47■□□□□ 0.55
LIME1-205ENST00000480139 GALNSP34059 522 aa18.47■□□□□ 0.55
LIME1-205ENST00000480139 STT3AP46977 705 aa18.47■□□□□ 0.55
LIME1-205ENST00000480139 Q0VFX4 171 aa18.47■□□□□ 0.55
LIME1-205ENST00000480139 CRLF3Q8IUI8 442 aa18.47■□□□□ 0.55
LIME1-205ENST00000480139 PARP9Q8IXQ6 854 aa18.47■□□□□ 0.55
LIME1-205ENST00000480139 M1APQ8TC57 530 aa18.47■□□□□ 0.55
LIME1-205ENST00000480139 TUBGCP3Q96CW5 907 aa18.47■□□□□ 0.55
LIME1-205ENST00000480139 UBL7Q96S82 380 aaPredicted RBP18.47■□□□□ 0.55
LIME1-205ENST00000480139 ARHGAP9Q9BRR9 750 aa18.47■□□□□ 0.55
LIME1-205ENST00000480139 PSME2Q9UL46 239 aa18.47■□□□□ 0.55
LIME1-205ENST00000480139 PPIEQ9UNP9 301 aaKnown RBP18.47■□□□□ 0.55
LIME1-205ENST00000480139 NBEAQ8NFP9 2946 aa18.46■□□□□ 0.55
LIME1-205ENST00000480139 TRPC5OSA6NMA1 111 aa18.46■□□□□ 0.55
LIME1-205ENST00000480139 PEX11AO75192 247 aa18.46■□□□□ 0.55
LIME1-205ENST00000480139 DNAJB5O75953 348 aa18.46■□□□□ 0.55
LIME1-205ENST00000480139 ALOX15P16050 662 aaPredicted RBP18.46■□□□□ 0.55
LIME1-205ENST00000480139 SDC1P18827 310 aa18.46■□□□□ 0.55
LIME1-205ENST00000480139 PIK3R1P27986 724 aa18.46■□□□□ 0.55
LIME1-205ENST00000480139 SLC26A5P58743 744 aa18.46■□□□□ 0.55
LIME1-205ENST00000480139 PLIN5Q00G26 463 aa18.46■□□□□ 0.55
LIME1-205ENST00000480139 MAD2L1Q13257 205 aaPredicted RBP18.46■□□□□ 0.55
LIME1-205ENST00000480139 FAM71E1Q6IPT2 247 aa18.46■□□□□ 0.55
LIME1-205ENST00000480139 JMJD6Q6NYC1 403 aaPredicted RBP18.46■□□□□ 0.55
LIME1-205ENST00000480139 ST13P4Q8IZP2 240 aaPredicted RBP18.46■□□□□ 0.55
LIME1-205ENST00000480139 TMEM132CQ8N3T6 1108 aa18.46■□□□□ 0.55
LIME1-205ENST00000480139 LSM14AQ8ND56 463 aaKnown RBP18.46■□□□□ 0.55
LIME1-205ENST00000480139 OR4K14Q8NGD5 310 aa18.46■□□□□ 0.55
LIME1-205ENST00000480139 UCN3Q969E3 161 aa18.46■□□□□ 0.55
LIME1-205ENST00000480139 ZNF764Q96H86 408 aaPredicted RBP18.46■□□□□ 0.55
LIME1-205ENST00000480139 NUF2Q9BZD4 464 aa18.46■□□□□ 0.55
LIME1-205ENST00000480139 LHPPQ9H008 270 aa18.46■□□□□ 0.55
LIME1-205ENST00000480139 MMP25Q9NPA2 562 aa18.46■□□□□ 0.55
LIME1-205ENST00000480139 ASIC5Q9NY37 505 aa18.46■□□□□ 0.55
LIME1-205ENST00000480139 HEY2Q9UBP5 337 aa18.46■□□□□ 0.55
LIME1-205ENST00000480139 G3BP2Q9UN86 482 aaKnown RBP18.46■□□□□ 0.55
LIME1-205ENST00000480139 MKRN2OSH3BPM6 223 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 IFNA16P05015 189 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 SLC35E2P0CK97 266 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 SFTPCP11686 197 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 BCKDHAP12694 445 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 COX7A2P14406 83 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 DDCP20711 480 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 ITGA3P26006 1051 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 CCL11P51671 97 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 ID2Q02363 134 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 EMX2Q04743 252 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 KCNAB2Q13303 367 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 MYBPC3Q14896 1274 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 BTBD16Q32M84 506 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 PCSK4Q6UW60 755 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 WDR75Q8IWA0 830 aaKnown RBP18.45■□□□□ 0.54
LIME1-205ENST00000480139 OR4N5Q8IXE1 308 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 SAMD14Q8IZD0 417 aaPredicted RBP18.45■□□□□ 0.54
LIME1-205ENST00000480139 MMP21Q8N119 569 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 NFAM1Q8NET5 270 aaPredicted RBP18.45■□□□□ 0.54
LIME1-205ENST00000480139 B3GNT7Q8NFL0 401 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 OR14A16Q8NHC5 309 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 PTPMT1Q8WUK0 201 aaPredicted RBP18.45■□□□□ 0.54
LIME1-205ENST00000480139 DAZLQ92904 295 aaKnown RBP18.45■□□□□ 0.54
LIME1-205ENST00000480139 DGAT2Q96PD7 388 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 AKTIPQ9H8T0 292 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms