RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 SLC15A4Q8N697 577 aa14.79□□□□□ -0.04
DDX56-210ENST00000479440 ART5Q96L15 291 aa14.79□□□□□ -0.04
DDX56-210ENST00000479440 Q96MF0 132 aa14.79□□□□□ -0.04
DDX56-210ENST00000479440 PIP5K1AQ99755 562 aa14.79□□□□□ -0.04
DDX56-210ENST00000479440 DOHHQ9BU89 302 aa14.79□□□□□ -0.04
DDX56-210ENST00000479440 EIF3LQ9Y262 564 aaKnown RBP14.79□□□□□ -0.04
DDX56-210ENST00000479440 SPACA6W5XKT8 324 aa14.79□□□□□ -0.04
DDX56-210ENST00000479440 MAP1AP78559 2803 aaPredicted RBP14.79□□□□□ -0.04
DDX56-210ENST00000479440 MYOCOSA0A1B0GUC4 107 aa14.78□□□□□ -0.04
DDX56-210ENST00000479440 MBD3L4A6NDZ8 208 aaPredicted RBP14.78□□□□□ -0.04
DDX56-210ENST00000479440 MBD3L3A6NE82 208 aaPredicted RBP14.78□□□□□ -0.04
DDX56-210ENST00000479440 MBD3L5A6NJ08 208 aaPredicted RBP14.78□□□□□ -0.04
DDX56-210ENST00000479440 CD8B2A6NJW9 211 aa14.78□□□□□ -0.04
DDX56-210ENST00000479440 ERN1O75460 977 aaKnown RBP14.78□□□□□ -0.04
DDX56-210ENST00000479440 CLEC3AO75596 197 aa14.78□□□□□ -0.04
DDX56-210ENST00000479440 IL18BPO95998 194 aa14.78□□□□□ -0.04
DDX56-210ENST00000479440 MAGEA3P43357 314 aa14.78□□□□□ -0.04
DDX56-210ENST00000479440 KCTD19Q17RG1 926 aaPredicted RBP14.78□□□□□ -0.04
DDX56-210ENST00000479440 ADPRMQ3LIE5 342 aa14.78□□□□□ -0.04
DDX56-210ENST00000479440 TBCELQ5QJ74 424 aa14.78□□□□□ -0.04
DDX56-210ENST00000479440 SBSNQ6UWP8 590 aa14.78□□□□□ -0.04
DDX56-210ENST00000479440 PRSS57Q6UWY2 283 aa14.78□□□□□ -0.04
DDX56-210ENST00000479440 RASGEF1CQ8N431 466 aa14.78□□□□□ -0.04
DDX56-210ENST00000479440 FAM13CQ8NE31 585 aa14.78□□□□□ -0.04
DDX56-210ENST00000479440 MBD3L2Q8NHZ7 208 aaPredicted RBP14.78□□□□□ -0.04
DDX56-210ENST00000479440 ZNF721Q8TF20 911 aa14.78□□□□□ -0.04
DDX56-210ENST00000479440 PIGTQ969N2 578 aa14.78□□□□□ -0.04
DDX56-210ENST00000479440 ISL2Q96A47 359 aa14.78□□□□□ -0.04
DDX56-210ENST00000479440 TRIB1Q96RU8 372 aa14.78□□□□□ -0.04
DDX56-210ENST00000479440 EGFL8Q99944 293 aa14.78□□□□□ -0.04
DDX56-210ENST00000479440 ROGDIQ9GZN7 287 aa14.78□□□□□ -0.04
DDX56-210ENST00000479440 PITHD1Q9GZP4 211 aaPredicted RBP14.78□□□□□ -0.04
DDX56-210ENST00000479440 LYRM4Q9HD34 91 aa14.78□□□□□ -0.04
DDX56-210ENST00000479440 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.78□□□□□ -0.04
DDX56-210ENST00000479440 CORO1CQ9ULV4 474 aaPredicted RBP14.78□□□□□ -0.04
DDX56-210ENST00000479440 CAMK2AQ9UQM7 478 aa14.78□□□□□ -0.04
DDX56-210ENST00000479440 SH3D21A4FU49 640 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 ANKDD1BA6NHY2 528 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 KDM4EB2RXH2 506 aaPredicted RBP14.77□□□□□ -0.05
DDX56-210ENST00000479440 INAFM1C9JVW0 142 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 SMAD7O15105 426 aaKnown RBP14.77□□□□□ -0.05
DDX56-210ENST00000479440 LDB3O75112 727 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 WDR47O94967 919 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 KRT14P02533 472 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 PGAM1P18669 254 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 SERPINB3P29508 390 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 CPA2P48052 419 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 HNMTP50135 292 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 CDKL1Q00532 357 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 CRYMQ14894 314 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 PPP1R3AQ16821 1122 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 FAM45BPQ6NSW5 357 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 ABHD17CQ6PCB6 329 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 C9orf40Q8IXQ3 194 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 CIARTQ8N365 385 aaPredicted RBP14.77□□□□□ -0.05
DDX56-210ENST00000479440 OR10G3Q8NGC4 313 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 FAM45AQ8TCE6 357 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 NTNG2Q96CW9 530 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 DGAT2Q96PD7 388 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 TIMP4Q99727 224 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 WDR83Q9BRX9 315 aaKnown RBP14.77□□□□□ -0.05
DDX56-210ENST00000479440 RBM24Q9BX46 236 aaKnown RBP14.77□□□□□ -0.05
DDX56-210ENST00000479440 EPB41L4BQ9H329 900 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 NT5DC2Q9H857 520 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 JKAMPQ9P055 326 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 GUCA1BQ9UMX6 200 aa14.77□□□□□ -0.05
DDX56-210ENST00000479440 CHCHD2Q9Y6H1 151 aaPredicted RBP14.77□□□□□ -0.05
DDX56-210ENST00000479440 CASKO14936 926 aa14.76□□□□□ -0.05
DDX56-210ENST00000479440 ETHE1O95571 254 aa14.76□□□□□ -0.05
DDX56-210ENST00000479440 FBXO45P0C2W1 286 aa14.76□□□□□ -0.05
DDX56-210ENST00000479440 TMIGD3P0DMS9 266 aaPredicted RBP14.76□□□□□ -0.05
DDX56-210ENST00000479440 BMP7P18075 431 aa14.76□□□□□ -0.05
DDX56-210ENST00000479440 MSH2P43246 934 aa14.76□□□□□ -0.05
DDX56-210ENST00000479440 RPL21P46778 160 aaKnown RBP14.76□□□□□ -0.05
DDX56-210ENST00000479440 KCNC1P48547 511 aa14.76□□□□□ -0.05
DDX56-210ENST00000479440 ZNF75DP51815 510 aa14.76□□□□□ -0.05
DDX56-210ENST00000479440 AGFG1P52594 562 aaKnown RBP14.76□□□□□ -0.05
DDX56-210ENST00000479440 RCAN2Q14206 197 aa14.76□□□□□ -0.05
DDX56-210ENST00000479440 LYPD8Q6UX82 237 aa14.76□□□□□ -0.05
DDX56-210ENST00000479440 FRA10AC1Q70Z53 315 aa14.76□□□□□ -0.05
DDX56-210ENST00000479440 YTHDF3Q7Z739 585 aaKnown RBP14.76□□□□□ -0.05
DDX56-210ENST00000479440 GALNT7Q86SF2 657 aa14.76□□□□□ -0.05
DDX56-210ENST00000479440 TMEM139Q8IV31 216 aa14.76□□□□□ -0.05
DDX56-210ENST00000479440 CNTN4Q8IWV2 1026 aa14.76□□□□□ -0.05
DDX56-210ENST00000479440 AGGF1Q8N302 714 aaeCLIP14.76□□□□□ -0.05
DDX56-210ENST00000479440 KCNC2Q96PR1 638 aa14.76□□□□□ -0.05
DDX56-210ENST00000479440 PROK2Q9HC23 129 aa14.76□□□□□ -0.05
DDX56-210ENST00000479440 CNOT11Q9UKZ1 510 aaKnown RBP14.76□□□□□ -0.05
DDX56-210ENST00000479440 A0A1W2PPR1 153 aa14.75□□□□□ -0.05
DDX56-210ENST00000479440 TTC4O95801 387 aa14.75□□□□□ -0.05
DDX56-210ENST00000479440 C1QAP02745 245 aa14.75□□□□□ -0.05
DDX56-210ENST00000479440 GABRB3P28472 473 aa14.75□□□□□ -0.05
DDX56-210ENST00000479440 STT3AP46977 705 aa14.75□□□□□ -0.05
DDX56-210ENST00000479440 PLIN5Q00G26 463 aa14.75□□□□□ -0.05
DDX56-210ENST00000479440 SLCO4C1Q6ZQN7 724 aa14.75□□□□□ -0.05
DDX56-210ENST00000479440 SLC29A4Q7RTT9 530 aa14.75□□□□□ -0.05
DDX56-210ENST00000479440 PDLIM5Q96HC4 596 aaKnown RBP14.75□□□□□ -0.05
DDX56-210ENST00000479440 SENP5Q96HI0 755 aaPredicted RBP14.75□□□□□ -0.05
DDX56-210ENST00000479440 SIGLEC10Q96LC7 697 aa14.75□□□□□ -0.05
DDX56-210ENST00000479440 ZFP3Q96NJ6 502 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms