RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 FCRLAQ7L513 359 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 COX8CQ7Z4L0 72 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 PRSS42Q7Z5A4 293 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 LSMEM2Q8N112 164 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 NIPA2Q8N8Q9 360 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 GBP7Q8N8V2 638 aaPredicted RBP3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 OR5AP2Q8NGF4 316 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 APOBEC4Q8WW27 367 aaKnown RBP3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 ZNRF4Q8WWF5 429 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 SUSD6Q92537 303 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 ATP6V0A1Q93050 837 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 AP2M1Q96CW1 435 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 C5orf30Q96GV9 206 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 PIGQQ9BRB3 760 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 PI4K2AQ9BTU6 479 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 ACAT2Q9BWD1 397 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 IDI2Q9BXS1 227 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 PUS3Q9BZE2 481 aaKnown RBP3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 OSBPL8Q9BZF1 889 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 CHMP4BQ9H444 224 aaKnown RBP3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 SLC52A3Q9NQ40 469 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 ZNF71Q9NQZ8 489 aaPredicted RBP3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 COMMD8Q9NX08 183 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 FBXL4Q9UKA2 621 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 ITM2BQ9Y287 266 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 MCM3APO60318 1980 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 PCNTO95613 3336 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 STK36Q9NRP7 1315 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 LCTP09848 1927 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 IGHV4-4A0A075B6R2 117 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 A0A087WUV0 522 aaPredicted RBP3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 SLCO1B7G3V0H7 640 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 H3BMM5 538 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 PGRMC2O15173 223 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 ACSL4O60488 711 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 SEC24AO95486 1093 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 THEGLP0DJG4 465 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 SLC2A2P11168 524 aaPredicted RBP3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 MAGEB1P43366 347 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 GYG1P46976 350 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 SERPINH1P50454 418 aaKnown RBP3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 NME5P56597 212 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 OR1D5P58170 312 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 KCNJ10P78508 379 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 SLC34A1Q06495 639 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 SGCGQ13326 291 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 ZNF74Q16587 644 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 GTDC1Q4AE62 458 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 ARMCX4Q5H9R4 360 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 PRAMEF8Q5VWM4 474 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 FAM53AQ6NSI3 398 aaPredicted RBP3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 ALKBH5Q6P6C2 394 aaKnown RBP3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 SLC24A5Q71RS6 500 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 CROCCP3Q8IVE0 287 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 CNTN4Q8IWV2 1026 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 TDHQ8IZJ6 230 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 TMEM99Q8N816 258 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 OR10G8Q8NGN5 311 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 MGARPQ8TDB4 240 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 GATAD1Q8WUU5 269 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 TMEM190Q8WZ59 177 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 SNX21Q969T3 373 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 EEF2KMTQ96G04 330 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 EPSTI1Q96J88 318 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 ZNF599Q96NL3 588 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 ZNF559Q9BR84 538 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 ACPTQ9BZG2 426 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 NACAP1Q9BZK3 213 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 TSPYL1Q9H0U9 437 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 ZDHHC6Q9H6R6 413 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 EGLN3Q9H6Z9 239 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 RPF1Q9H9Y2 349 aaKnown RBP3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 MAGEF1Q9HAY2 307 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 MAN2C1Q9NTJ4 1040 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 PANK4Q9NVE7 773 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 TBC1D13Q9NVG8 400 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 DNAJC11Q9NVH1 559 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 CYP39A1Q9NYL5 469 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 TMOD2Q9NZR1 351 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 MAD2L2Q9UI95 211 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 GMEB2Q9UKD1 530 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 APPL1Q9UKG1 709 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 DDX19BQ9UMR2 479 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 PPP2R2CQ9Y2T4 447 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 PDE4DIPQ5VU43 2346 aa3.51□□□□□ -1.85
CDC42BPA-212ENST00000478573 KIAA1217Q5T5P2 1943 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 MROH7-TTC4A0A0A0MT08 1334 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 KIAA0100Q14667 2235 aaKnown RBP3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 A0A1B0GUL7 405 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 SNURFLB1AK76 121 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 E5RGE8 158 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 CACNB4O00305 520 aaPredicted RBP3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 FRAT2O75474 233 aaPredicted RBP3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 TRMUO75648 421 aaKnown RBP3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 CDC123O75794 336 aaPredicted RBP3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 MT-ND3P03897 115 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 CD48P09326 243 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 UQCRFS1P1P0C7P4 283 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 STMN1P16949 149 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms