RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 BMP5P22003 454 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 CEACAM8P31997 349 aaPredicted RBP8.89□□□□□ -0.99
CCM2-210ENST00000478169 TIMP3P35625 211 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 GGT5P36269 586 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 PIGAP37287 484 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 KCNJ2P63252 427 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 IGLV3-21P80748 117 aaPredicted RBP8.89□□□□□ -0.99
CCM2-210ENST00000478169 FRG1Q14331 258 aaKnown RBP8.89□□□□□ -0.99
CCM2-210ENST00000478169 SF3B4Q15427 424 aaKnown RBP eCLIP8.89□□□□□ -0.99
CCM2-210ENST00000478169 PPP1R7Q15435 360 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 CDKL4Q5MAI5 379 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 ADGRD1Q6QNK2 874 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 PDIK1LQ8N165 341 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 TCAIMQ8N3R3 496 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 LIX1Q8N485 282 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 RELL2Q8NC24 303 aaPredicted RBP8.89□□□□□ -0.99
CCM2-210ENST00000478169 SREK1Q8WXA9 508 aaKnown RBP8.89□□□□□ -0.99
CCM2-210ENST00000478169 ANKRD9Q96BM1 317 aaPredicted RBP8.89□□□□□ -0.99
CCM2-210ENST00000478169 SPACA9Q96E40 222 aaPredicted RBP8.89□□□□□ -0.99
CCM2-210ENST00000478169 WDR34Q96EX3 536 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 PTCD3Q96EY7 689 aaKnown RBP8.89□□□□□ -0.99
CCM2-210ENST00000478169 SENP5Q96HI0 755 aaPredicted RBP8.89□□□□□ -0.99
CCM2-210ENST00000478169 VPS39Q96JC1 886 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 RUNDC3BQ96NL0 473 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 F2RL3Q96RI0 385 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 TBCDQ9BTW9 1192 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 CNOT10Q9H9A5 744 aaKnown RBP8.89□□□□□ -0.99
CCM2-210ENST00000478169 PLAC1Q9HBJ0 212 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 CNIH4Q9P003 139 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 ZNF490Q9ULM2 529 aaPredicted RBP8.89□□□□□ -0.99
CCM2-210ENST00000478169 JRKLQ9Y4A0 524 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 EXPH5Q8NEV8 1989 aa8.89□□□□□ -0.99
CCM2-210ENST00000478169 GOLGA6L10A0A0M3HER8 536 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 FAM95CA0A1B0GW59 222 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 TUBAL3A6NHL2 446 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 ATE1O95260 518 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 IL2RAP01589 272 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 IGKV3-11P04433 115 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 FBXO45P0C2W1 286 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 EPXP11678 715 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 ATP5A1P25705 553 aaKnown RBP8.88□□□□□ -0.99
CCM2-210ENST00000478169 SERPINB3P29508 390 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 ELK3P41970 407 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 STT3AP46977 705 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 LTBQ06643 244 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 ILF2Q12905 390 aaKnown RBP8.88□□□□□ -0.99
CCM2-210ENST00000478169 LAPTM5Q13571 262 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 KEAP1Q14145 624 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 TGFBIQ15582 683 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 TSNQ15631 228 aaKnown RBP8.88□□□□□ -0.99
CCM2-210ENST00000478169 HIST2H2ACQ16777 129 aaPredicted RBP8.88□□□□□ -0.99
CCM2-210ENST00000478169 DEFB113Q30KQ7 82 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 C18orf21Q32NC0 220 aaPredicted RBP8.88□□□□□ -0.99
CCM2-210ENST00000478169 TMEM35AQ53FP2 167 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 PAGE2BQ5JRK9 111 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 STEAP4Q687X5 459 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 HIST2H2AA3Q6FI13 130 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 TRMT10BQ6PF06 316 aaKnown RBP8.88□□□□□ -0.99
CCM2-210ENST00000478169 LYPD8Q6UX82 237 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 ZC3HC1Q86WB0 502 aaKnown RBP8.88□□□□□ -0.99
CCM2-210ENST00000478169 GAS2L3Q86XJ1 694 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 KIF18BQ86Y91 864 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 MED12LQ86YW9 2145 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 LACC1Q8IV20 430 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 C9orf40Q8IXQ3 194 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 ACOT4Q8N9L9 421 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 TNIP2Q8NFZ5 429 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 ACTRT1Q8TDG2 376 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 ANKRD49Q8WVL7 239 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 LRRC39Q96DD0 335 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 RBM18Q96H35 190 aaKnown RBP8.88□□□□□ -0.99
CCM2-210ENST00000478169 C18orf12Q96KH6 178 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 ART5Q96L15 291 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 DGAT2Q96PD7 388 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 MAPKAP1Q9BPZ7 522 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 EFCAB11Q9BUY7 163 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 SLC6A15Q9H2J7 730 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 POPDC3Q9HBV1 291 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 PROK2Q9HC23 129 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 DNAJC11Q9NVH1 559 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.88□□□□□ -0.99
CCM2-210ENST00000478169 ASIC3Q9UHC3 531 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 CHCHD2Q9Y6H1 151 aaPredicted RBP8.88□□□□□ -0.99
CCM2-210ENST00000478169 JMJD1CQ15652 2540 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 RTTNQ86VV8 2226 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 MED12Q93074 2177 aa8.88□□□□□ -0.99
CCM2-210ENST00000478169 A0A1B0GTL3 188 aa8.87□□□□□ -0.99
CCM2-210ENST00000478169 ANKRD33BA6NCL7 494 aa8.87□□□□□ -0.99
CCM2-210ENST00000478169 NCF1BA6NI72 391 aaPredicted RBP8.87□□□□□ -0.99
CCM2-210ENST00000478169 LRRC3CA6NJW4 275 aa8.87□□□□□ -0.99
CCM2-210ENST00000478169 NCF1CA8MVU1 366 aaPredicted RBP8.87□□□□□ -0.99
CCM2-210ENST00000478169 TAPBPO15533 448 aa8.87□□□□□ -0.99
CCM2-210ENST00000478169 PRAMEF4O60810 478 aa8.87□□□□□ -0.99
CCM2-210ENST00000478169 STK16O75716 305 aa8.87□□□□□ -0.99
CCM2-210ENST00000478169 SCELO95171 688 aa8.87□□□□□ -0.99
CCM2-210ENST00000478169 C1QAP02745 245 aa8.87□□□□□ -0.99
CCM2-210ENST00000478169 NCF1P14598 390 aaPredicted RBP8.87□□□□□ -0.99
CCM2-210ENST00000478169 HIST1H1TP22492 207 aaPredicted RBP8.87□□□□□ -0.99
CCM2-210ENST00000478169 CPN2P22792 545 aa8.87□□□□□ -0.99
CCM2-210ENST00000478169 TACR1P25103 407 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms