RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 WDR41Q9HAD4 459 aa18.72■□□□□ 0.59
ACTB-210ENST00000477812 C5AR2Q9P296 337 aa18.72■□□□□ 0.59
ACTB-210ENST00000477812 GPR45Q9Y5Y3 372 aa18.72■□□□□ 0.59
ACTB-210ENST00000477812 SCN2AQ99250 2005 aa18.72■□□□□ 0.59
ACTB-210ENST00000477812 A0A0G2JND7 137 aa18.71■□□□□ 0.59
ACTB-210ENST00000477812 GMNCA6NCL1 334 aa18.71■□□□□ 0.59
ACTB-210ENST00000477812 SOCS6O14544 535 aa18.71■□□□□ 0.59
ACTB-210ENST00000477812 FURINP09958 794 aa18.71■□□□□ 0.59
ACTB-210ENST00000477812 C8orf89P0DMQ9 161 aa18.71■□□□□ 0.59
ACTB-210ENST00000477812 ASMTP46597 345 aa18.71■□□□□ 0.59
ACTB-210ENST00000477812 FOLH1Q04609 750 aa18.71■□□□□ 0.59
ACTB-210ENST00000477812 C2orf80Q0P641 193 aa18.71■□□□□ 0.59
ACTB-210ENST00000477812 SLC13A2Q13183 592 aa18.71■□□□□ 0.59
ACTB-210ENST00000477812 MFSD4BQ5TF39 518 aa18.71■□□□□ 0.59
ACTB-210ENST00000477812 NXNQ6DKJ4 435 aa18.71■□□□□ 0.59
ACTB-210ENST00000477812 MRGPREQ86SM8 312 aa18.71■□□□□ 0.59
ACTB-210ENST00000477812 CDC26Q8NHZ8 85 aa18.71■□□□□ 0.59
ACTB-210ENST00000477812 PTCHD1Q96NR3 888 aa18.71■□□□□ 0.59
ACTB-210ENST00000477812 TMEM120AQ9BXJ8 343 aa18.71■□□□□ 0.59
ACTB-210ENST00000477812 TAS2R7Q9NYW3 318 aa18.71■□□□□ 0.59
ACTB-210ENST00000477812 KLHL14Q9P2G3 628 aa18.71■□□□□ 0.59
ACTB-210ENST00000477812 A0A1W2PS29 197 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 E9PBE3 544 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 PCDH17O14917 1159 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 NKX2-8O15522 239 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 KLHL41O60662 606 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 TBX19O60806 448 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 GPR75O95800 540 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 IGHEP01854 428 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 ITPKBP27987 946 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 CLDN8P56748 225 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 ID2Q02363 134 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 NSDHLQ15738 373 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 ATP1A1-AS1Q5TC04 95 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 CPZQ66K79 652 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 FAAH2Q6GMR7 532 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 KIRREL2Q6UWL6 708 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 ANKRD37Q7Z713 158 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 OR4N5Q8IXE1 308 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 C10orf82Q8WW14 230 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 REEP4Q9H6H4 257 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 ADAM21Q9UKJ8 722 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 PTPRQQ9UMZ3 2332 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 LAMA5O15230 3695 aa18.7■□□□□ 0.58
ACTB-210ENST00000477812 ZNF891A8MT65 544 aaPredicted RBP18.69■□□□□ 0.58
ACTB-210ENST00000477812 SCAMP2O15127 329 aaKnown RBP18.69■□□□□ 0.58
ACTB-210ENST00000477812 ZZEF1O43149 2961 aa18.69■□□□□ 0.58
ACTB-210ENST00000477812 LRATO95237 230 aa18.69■□□□□ 0.58
ACTB-210ENST00000477812 PPP2R1BP30154 601 aa18.69■□□□□ 0.58
ACTB-210ENST00000477812 OTX2P32243 289 aa18.69■□□□□ 0.58
ACTB-210ENST00000477812 ALDH9A1P49189 494 aa18.69■□□□□ 0.58
ACTB-210ENST00000477812 MRPL19P49406 292 aaKnown RBP18.69■□□□□ 0.58
ACTB-210ENST00000477812 TICAM1Q8IUC6 712 aa18.69■□□□□ 0.58
ACTB-210ENST00000477812 KRTCAP2Q8N6L1 136 aa18.69■□□□□ 0.58
ACTB-210ENST00000477812 OR11G2Q8NGC1 345 aa18.69■□□□□ 0.58
ACTB-210ENST00000477812 GFM2Q969S9 779 aaKnown RBP18.69■□□□□ 0.58
ACTB-210ENST00000477812 C8orf44Q96CB5 159 aa18.69■□□□□ 0.58
ACTB-210ENST00000477812 CNRIP1Q96F85 164 aaPredicted RBP18.69■□□□□ 0.58
ACTB-210ENST00000477812 MARK4Q96L34 752 aa18.69■□□□□ 0.58
ACTB-210ENST00000477812 ZNF681Q96N22 645 aa18.69■□□□□ 0.58
ACTB-210ENST00000477812 WDR77Q9BQA1 342 aaPredicted RBP18.69■□□□□ 0.58
ACTB-210ENST00000477812 SDR39U1Q9NRG7 319 aaPredicted RBP18.69■□□□□ 0.58
ACTB-210ENST00000477812 WDR70Q9NW82 654 aa18.69■□□□□ 0.58
ACTB-210ENST00000477812 ATP6V1HQ9UI12 483 aa18.69■□□□□ 0.58
ACTB-210ENST00000477812 MAP1BP46821 2468 aaKnown RBP18.68■□□□□ 0.58
ACTB-210ENST00000477812 LOC400499M0QZD8 3231 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 SRRM3A6NNA2 597 aaPredicted RBP18.68■□□□□ 0.58
ACTB-210ENST00000477812 UBDO15205 165 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 AKAP10O43572 662 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 COX6A1P12074 109 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 IDO1P14902 403 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 PRPS1L1P21108 318 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 DUSP2Q05923 314 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 CDC20Q12834 499 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 SERTAD2Q14140 314 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 PCOLCEQ15113 449 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 CEBPEQ15744 281 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 GSTA3Q16772 222 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 MPEG1Q2M385 716 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 ZNF750Q32MQ0 723 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 ZNF385BQ569K4 471 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 RAB43Q86YS6 212 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 NUDT8Q8WV74 236 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 METTL21AQ8WXB1 218 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 KLHL29Q96CT2 875 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 MTERF3Q96E29 417 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 TEX37Q96LM6 180 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 ALOXE3Q9BYJ1 711 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 ZNF385DQ9H6B1 395 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 UTS2RQ9UKP6 389 aa18.68■□□□□ 0.58
ACTB-210ENST00000477812 GABRR3A8MPY1 467 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 PCSK2P16519 638 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 HPCAL1P37235 193 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 STT3AP46977 705 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 ARFIP2P53365 341 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 ACTN3Q08043 901 aaPredicted RBP18.67■□□□□ 0.58
ACTB-210ENST00000477812 STX4Q12846 297 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 SF3A3Q12874 501 aaKnown RBP eCLIP18.67■□□□□ 0.587e-7■■■□□ 18.3
ACTB-210ENST00000477812 ATP1A4Q13733 1029 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 PDCD4Q53EL6 469 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms