RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 VTI1BQ9UEU0 232 aa17.75■□□□□ 0.43
GMDS-204ENST00000476972 SH3BGRL2Q9UJC5 107 aa17.75■□□□□ 0.43
GMDS-204ENST00000476972 ATG4BQ9Y4P1 393 aa17.75■□□□□ 0.43
GMDS-204ENST00000476972 PCDHGB6Q9Y5F9 930 aa17.75■□□□□ 0.43
GMDS-204ENST00000476972 CLCA3PQ9Y6N3 262 aa17.75■□□□□ 0.43
GMDS-204ENST00000476972 ANKRD17O75179 2603 aaKnown RBP17.74■□□□□ 0.43
GMDS-204ENST00000476972 FCHO1O14526 889 aa17.74■□□□□ 0.43
GMDS-204ENST00000476972 TMPRSS11DO60235 418 aa17.74■□□□□ 0.43
GMDS-204ENST00000476972 DLX3O60479 287 aa17.74■□□□□ 0.43
GMDS-204ENST00000476972 NEURL1O76050 574 aa17.74■□□□□ 0.43
GMDS-204ENST00000476972 SEMA3DO95025 777 aa17.74■□□□□ 0.43
GMDS-204ENST00000476972 HTR1EP28566 365 aa17.74■□□□□ 0.43
GMDS-204ENST00000476972 IFT88Q13099 833 aa17.74■□□□□ 0.43
GMDS-204ENST00000476972 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.74■□□□□ 0.43
GMDS-204ENST00000476972 FAM219BQ5XKK7 198 aa17.74■□□□□ 0.43
GMDS-204ENST00000476972 C18orf63Q68DL7 685 aa17.74■□□□□ 0.43
GMDS-204ENST00000476972 TTC19Q6DKK2 380 aaPredicted RBP17.74■□□□□ 0.43
GMDS-204ENST00000476972 MRM1Q6IN84 353 aaKnown RBP17.74■□□□□ 0.43
GMDS-204ENST00000476972 MILR1Q7Z6M3 343 aa17.74■□□□□ 0.43
GMDS-204ENST00000476972 NUDT13Q86X67 352 aa17.74■□□□□ 0.43
GMDS-204ENST00000476972 CNPY4Q8N129 248 aa17.74■□□□□ 0.43
GMDS-204ENST00000476972 ZNF808Q8N4W9 903 aaPredicted RBP17.74■□□□□ 0.43
GMDS-204ENST00000476972 OR14A16Q8NHC5 309 aa17.74■□□□□ 0.43
GMDS-204ENST00000476972 PTPMT1Q8WUK0 201 aaPredicted RBP17.74■□□□□ 0.43
GMDS-204ENST00000476972 DAZLQ92904 295 aaKnown RBP17.74■□□□□ 0.43
GMDS-204ENST00000476972 SERPINI1Q99574 410 aa17.74■□□□□ 0.43
GMDS-204ENST00000476972 RPF2Q9H7B2 306 aaKnown RBP17.74■□□□□ 0.43
GMDS-204ENST00000476972 DDX31Q9H8H2 851 aaKnown RBP17.74■□□□□ 0.43
GMDS-204ENST00000476972 LYARQ9NX58 379 aaKnown RBP17.74■□□□□ 0.43
GMDS-204ENST00000476972 LRFN1Q9P244 771 aa17.74■□□□□ 0.43
GMDS-204ENST00000476972 POLQO75417 2590 aa17.74■□□□□ 0.43
GMDS-204ENST00000476972 PDZD2O15018 2839 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 A0A1W2PPM1 405 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 FOXO6A8MYZ6 492 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 C17orf105B2RV13 164 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 CDK2AP1O14519 115 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 PRKNO60260 465 aaPredicted RBP17.73■□□□□ 0.43
GMDS-204ENST00000476972 GSTA1P08263 222 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 CD46P15529 392 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 BUD31P41223 144 aaPredicted RBP17.73■□□□□ 0.43
GMDS-204ENST00000476972 SLCO1A2P46721 670 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 IGLV3-21P80748 117 aaPredicted RBP17.73■□□□□ 0.43
GMDS-204ENST00000476972 CLCQ05315 142 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 ZNF630Q2M218 657 aaPredicted RBP17.73■□□□□ 0.43
GMDS-204ENST00000476972 UNC50Q53HI1 259 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 ZNF678Q5SXM1 525 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 C10orf62Q5T681 223 aaPredicted RBP17.73■□□□□ 0.43
GMDS-204ENST00000476972 MTFR2Q6P444 385 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 CYP20A1Q6UW02 462 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 BNC2Q6ZN30 1099 aaPredicted RBP17.73■□□□□ 0.43
GMDS-204ENST00000476972 ZGRF1Q86YA3 2104 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 OR4N5Q8IXE1 308 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 HORMAD2Q8N7B1 307 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 TRPC4APQ8TEL6 797 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.73■□□□□ 0.43
GMDS-204ENST00000476972 ELOVL6Q9H5J4 265 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 CHST11Q9NPF2 352 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 FARSBQ9NSD9 589 aaKnown RBP17.73■□□□□ 0.43
GMDS-204ENST00000476972 ZNF225Q9UK10 706 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 ASB4Q9Y574 426 aa17.73■□□□□ 0.43
GMDS-204ENST00000476972 TACC2O95359 2948 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 CSMD2Q7Z408 3487 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 SMIM23A6NLE4 172 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 PROM1O43490 865 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 SLC19A2O60779 497 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 SLC25A12O75746 678 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 SUPT7LO94864 414 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 GBAP04062 536 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 SNRPB2P08579 225 aaKnown RBP17.72■□□□□ 0.43
GMDS-204ENST00000476972 FAM58BPP0C7Q3 252 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 NR2F6P10588 404 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 ATP5F1P24539 256 aaPredicted RBP17.72■□□□□ 0.43
GMDS-204ENST00000476972 TLX1P31314 330 aaPredicted RBP17.72■□□□□ 0.43
GMDS-204ENST00000476972 TRHRP34981 398 aaPredicted RBP17.72■□□□□ 0.43
GMDS-204ENST00000476972 HSD17B3P37058 310 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 CYB561P49447 251 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 FOLH1Q04609 750 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 RBPJQ06330 500 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 SGO1Q5FBB7 561 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 RPTNQ6XPR3 784 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 ZNF227Q86WZ6 799 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 ZNF321PQ8N8H1 164 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 TMEM178AQ8NBL3 297 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 MORN4Q8NDC4 146 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 SLC2A12Q8TD20 617 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 EPS8L3Q8TE67 593 aaKnown RBP17.72■□□□□ 0.43
GMDS-204ENST00000476972 TANKQ92844 425 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 MRPL1Q9BYD6 325 aaKnown RBP17.72■□□□□ 0.43
GMDS-204ENST00000476972 OR8D2Q9GZM6 311 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 TRIM45Q9H8W5 580 aaPredicted RBP17.72■□□□□ 0.43
GMDS-204ENST00000476972 TRPS1Q9UHF7 1281 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 EMCNQ9ULC0 261 aa17.72■□□□□ 0.43
GMDS-204ENST00000476972 A0A1W2PR48 441 aa17.71■□□□□ 0.43
GMDS-204ENST00000476972 TMEM200CA6NKL6 621 aa17.71■□□□□ 0.43
GMDS-204ENST00000476972 GLRA3O75311 464 aa17.71■□□□□ 0.43
GMDS-204ENST00000476972 ITGA10O75578 1167 aa17.71■□□□□ 0.43
GMDS-204ENST00000476972 ZFAND5O76080 213 aa17.71■□□□□ 0.43
GMDS-204ENST00000476972 AIFM1O95831 613 aa17.71■□□□□ 0.43
GMDS-204ENST00000476972 SP1P08047 785 aa17.71■□□□□ 0.43
GMDS-204ENST00000476972 TNNI3P19429 210 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms