RNA–Protein interactions for RNA: ENST00000476317.2

SIPA1L3-202, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 3

Gene SIPA1L3, Length 608 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-202ENST00000476317 HIST2H2ACQ16777 129 aaPredicted RBP17.33■□□□□ 0.36
SIPA1L3-202ENST00000476317 KHDRBS2Q5VWX1 349 aaKnown RBP17.33■□□□□ 0.36
SIPA1L3-202ENST00000476317 C18orf63Q68DL7 685 aa17.33■□□□□ 0.36
SIPA1L3-202ENST00000476317 HIST2H2AA3Q6FI13 130 aa17.33■□□□□ 0.36
SIPA1L3-202ENST00000476317 MED27Q6P2C8 311 aa17.33■□□□□ 0.36
SIPA1L3-202ENST00000476317 ZNF585AQ6P3V2 769 aa17.33■□□□□ 0.36
SIPA1L3-202ENST00000476317 LYPD8Q6UX82 237 aa17.33■□□□□ 0.36
SIPA1L3-202ENST00000476317 GK5Q6ZS86 529 aa17.33■□□□□ 0.36
SIPA1L3-202ENST00000476317 TRILQ7L0X0 811 aa17.33■□□□□ 0.36
SIPA1L3-202ENST00000476317 SLC22A16Q86VW1 577 aa17.33■□□□□ 0.36
SIPA1L3-202ENST00000476317 DMRTC2Q8IXT2 367 aaPredicted RBP17.33■□□□□ 0.36
SIPA1L3-202ENST00000476317 GOLM1Q8NBJ4 401 aa17.33■□□□□ 0.36
SIPA1L3-202ENST00000476317 UBTD2Q8WUN7 234 aa17.33■□□□□ 0.36
SIPA1L3-202ENST00000476317 IL1RL2Q9HB29 575 aa17.33■□□□□ 0.36
SIPA1L3-202ENST00000476317 NUDT4Q9NZJ9 180 aa17.33■□□□□ 0.36
SIPA1L3-202ENST00000476317 ATG4BQ9Y4P1 393 aa17.33■□□□□ 0.36
SIPA1L3-202ENST00000476317 DNAJC13O75165 2243 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 ATP6AP2A0A1C7CYW4 349 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 SYNDIG1LA6NDD5 238 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 WASHC1A8K0Z3 465 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 EIF3HO15372 352 aaKnown RBP eCLIP17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 ATP6AP2O75787 350 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 MTHFD2P13995 350 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 CAPN3P20807 821 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 ACVR2AP27037 513 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 HNRNPH2P55795 449 aaKnown RBP17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 IRF9Q00978 393 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 CALCOCO2Q13137 446 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 DDX39BQ13838 428 aaKnown RBP17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 AP5B1Q2VPB7 878 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 TMEM35AQ53FP2 167 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 PIGGQ5H8A4 983 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 NDUFAF5Q5TEU4 345 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 PAOXQ6QHF9 649 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 RGS9BPQ6ZS82 235 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 CYS1Q717R9 158 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 FAM109AQ8N4B1 249 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 PPM1NQ8N819 430 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 BBOF1Q8ND07 529 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 SENP5Q96HI0 755 aaPredicted RBP17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 CNPPD1Q9BV87 410 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 PHACTR1Q9C0D0 580 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 ROGDIQ9GZN7 287 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 PRM3Q9NNZ6 103 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 SH2D2AQ9NP31 389 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 SACM1LQ9NTJ5 587 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 SPRR3Q9UBC9 169 aa17.32■□□□□ 0.36
SIPA1L3-202ENST00000476317 VPS13CQ709C8 3753 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 NF1P21359 2839 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 UQCRHLA0A096LP55 91 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 A0A1B0GVC2 190 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 LRRC14BA6NHZ5 514 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 K7EPI3 171 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 PLPP1O14494 284 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 KERAO60938 352 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 LRATO95237 230 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 RFPL3SP0C7P2 107 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 GLI4P10075 376 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 ADH7P40394 386 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 STT3AP46977 705 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 FOLH1Q04609 750 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 ILF2Q12905 390 aaKnown RBP17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 SLAMF1Q13291 335 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 ZNF791Q3KP31 576 aaPredicted RBP17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 GRTP1Q5TC63 336 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 PRAMEF20Q5VT98 475 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 OR4C11Q6IEV9 310 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 GRHL2Q6ISB3 625 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 OPN5Q6U736 354 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 RAPH1Q70E73 1250 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 LIX1LQ8IVB5 337 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 CENPLQ8N0S6 344 aaPredicted RBP17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 SRFBP1Q8NEF9 429 aaKnown RBP17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 SPATA4Q8NEY3 305 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 OR5L2Q8NGL0 311 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 HUS1BQ8NHY5 278 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 STAG3L4Q8TBR4 150 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 NRGNQ92686 78 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 UCN3Q969E3 161 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 NXNL1Q96CM4 212 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 DGAT2Q96PD7 388 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 TTYH2Q9BSA4 534 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 ZNF717Q9BY31 904 aaPredicted RBP17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 PROK2Q9HC23 129 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 KCNJ16Q9NPI9 418 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 DMRT3Q9NQL9 472 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 OPTCQ9UBM4 332 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 COPS7AQ9UBW8 275 aa17.31■□□□□ 0.36
SIPA1L3-202ENST00000476317 A0A0G2JNJ9 132 aa17.3■□□□□ 0.36
SIPA1L3-202ENST00000476317 OR14I1A6ND48 311 aa17.3■□□□□ 0.36
SIPA1L3-202ENST00000476317 FAM187AA6NFU0 413 aa17.3■□□□□ 0.36
SIPA1L3-202ENST00000476317 DYNC1I1O14576 645 aa17.3■□□□□ 0.36
SIPA1L3-202ENST00000476317 P04436 131 aa17.3■□□□□ 0.36
SIPA1L3-202ENST00000476317 SPRP35270 261 aaPredicted RBP17.3■□□□□ 0.36
SIPA1L3-202ENST00000476317 TNFRSF17Q02223 184 aa17.3■□□□□ 0.36
SIPA1L3-202ENST00000476317 PCDH1Q08174 1060 aa17.3■□□□□ 0.36
SIPA1L3-202ENST00000476317 MPEG1Q2M385 716 aa17.3■□□□□ 0.36
SIPA1L3-202ENST00000476317 HYAL4Q2M3T9 481 aa17.3■□□□□ 0.36
SIPA1L3-202ENST00000476317 DEPDC1Q5TB30 811 aa17.3■□□□□ 0.36
SIPA1L3-202ENST00000476317 ZDHHC24Q6UX98 284 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms