RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 GRID1Q9ULK0 1009 aa22.38■■□□□ 1.17
CPNE1-223ENST00000475146 GLOD5A6NK44 160 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 AIFM1O95831 613 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 KRT6AP02538 564 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 KRT6BP04259 564 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 EDN3P14138 238 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 KRT4P19013 534 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 HMOX2P30519 316 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 CRHR1P34998 444 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 STT3AP46977 705 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 KRT6CP48668 564 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 CYB561P49447 251 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 IGLV3-21P80748 117 aaPredicted RBP22.37■■□□□ 1.17
CPNE1-223ENST00000475146 PLIN5Q00G26 463 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 PMP22Q01453 160 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 LCP2Q13094 533 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 CCDC153Q494R4 210 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 TCHHL1Q5QJ38 904 aaPredicted RBP22.37■■□□□ 1.17
CPNE1-223ENST00000475146 WDR93Q6P2C0 686 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 EMBQ6PCB8 327 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 TMEM178AQ8NBL3 297 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 BRF2Q9HAW0 419 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 ADAM29Q9UKF5 820 aa22.37■■□□□ 1.17
CPNE1-223ENST00000475146 G3V2L1 256 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 MANBAO00462 879 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 CDK2AP1O14519 115 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 DYRK3O43781 588 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 PRKNO60260 465 aaPredicted RBP22.36■■□□□ 1.17
CPNE1-223ENST00000475146 PLIN3O60664 434 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 ITGA10O75578 1167 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 NEURL1O76050 574 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 CRYABP02511 175 aaKnown RBP22.36■■□□□ 1.17
CPNE1-223ENST00000475146 NUDT17P0C025 328 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 CCNYL2Q5T2Q4 361 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 HSDL2Q6YN16 418 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 ARMC10Q8N2F6 343 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 METTL4Q8N3J2 472 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 TMEM156Q8N614 296 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 ZNF321PQ8N8H1 164 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 METTL6Q8TCB7 284 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 SLC2A12Q8TD20 617 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 NR4A3Q92570 626 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 RBM18Q96H35 190 aaKnown RBP22.36■■□□□ 1.17
CPNE1-223ENST00000475146 SLX1AQ9BQ83 275 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 NMRK1Q9NWW6 199 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 COPS7AQ9UBW8 275 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 PCDHGB6Q9Y5F9 930 aa22.36■■□□□ 1.17
CPNE1-223ENST00000475146 OR10H2O60403 315 aa22.35■■□□□ 1.17
CPNE1-223ENST00000475146 SLC25A12O75746 678 aa22.35■■□□□ 1.17
CPNE1-223ENST00000475146 DDAH2O95865 285 aa22.35■■□□□ 1.17
CPNE1-223ENST00000475146 ALOX15P16050 662 aaPredicted RBP22.35■■□□□ 1.17
CPNE1-223ENST00000475146 HLCSP50747 726 aa22.35■■□□□ 1.17
CPNE1-223ENST00000475146 MAPK12P53778 367 aa22.35■■□□□ 1.17
CPNE1-223ENST00000475146 PKNOX1P55347 436 aa22.35■■□□□ 1.17
CPNE1-223ENST00000475146 SRSF11Q05519 484 aaKnown RBP22.35■■□□□ 1.17
CPNE1-223ENST00000475146 OR52E8Q6IFG1 317 aa22.35■■□□□ 1.17
CPNE1-223ENST00000475146 SLC25A25Q6KCM7 469 aa22.35■■□□□ 1.17
CPNE1-223ENST00000475146 COMMD6Q7Z4G1 85 aa22.35■■□□□ 1.17
CPNE1-223ENST00000475146 RIBC1Q8N443 379 aaPredicted RBP22.35■■□□□ 1.17
CPNE1-223ENST00000475146 TMEM125Q96AQ2 219 aa22.35■■□□□ 1.17
CPNE1-223ENST00000475146 PPWD1Q96BP3 646 aaKnown RBP22.35■■□□□ 1.17
CPNE1-223ENST00000475146 SCMH1Q96GD3 660 aa22.35■■□□□ 1.17
CPNE1-223ENST00000475146 C12orf65Q9H3J6 166 aaKnown RBP22.35■■□□□ 1.17
CPNE1-223ENST00000475146 GSTO2Q9H4Y5 243 aa22.35■■□□□ 1.17
CPNE1-223ENST00000475146 LIN28AQ9H9Z2 209 aaKnown RBP22.35■■□□□ 1.17
CPNE1-223ENST00000475146 TEX10Q9NXF1 929 aaPredicted RBP22.35■■□□□ 1.17
CPNE1-223ENST00000475146 WASHC1A8K0Z3 465 aa22.34■■□□□ 1.17
CPNE1-223ENST00000475146 GPR75O95800 540 aa22.34■■□□□ 1.17
CPNE1-223ENST00000475146 ENO1P06733 434 aaKnown RBP22.34■■□□□ 1.17
CPNE1-223ENST00000475146 SP1P08047 785 aa22.34■■□□□ 1.17
CPNE1-223ENST00000475146 HSD3B1P14060 373 aa22.34■■□□□ 1.17
CPNE1-223ENST00000475146 HSD3B2P26439 372 aa22.34■■□□□ 1.17
CPNE1-223ENST00000475146 TRHRP34981 398 aaPredicted RBP22.34■■□□□ 1.17
CPNE1-223ENST00000475146 SSR4P51571 173 aa22.34■■□□□ 1.17
CPNE1-223ENST00000475146 BIKQ13323 160 aa22.34■■□□□ 1.17
CPNE1-223ENST00000475146 MAPKAPK3Q16644 382 aa22.34■■□□□ 1.17
CPNE1-223ENST00000475146 ERCC6LQ2NKX8 1250 aa22.34■■□□□ 1.17
CPNE1-223ENST00000475146 CFAP157Q5JU67 520 aa22.34■■□□□ 1.17
CPNE1-223ENST00000475146 ZNF324BQ6AW86 544 aaPredicted RBP22.34■■□□□ 1.17
CPNE1-223ENST00000475146 C16orf47Q6ZP98 133 aaPredicted RBP22.34■■□□□ 1.17
CPNE1-223ENST00000475146 GALNTL5Q7Z4T8 443 aa22.34■■□□□ 1.17
CPNE1-223ENST00000475146 FAM98AQ8NCA5 519 aaKnown RBP22.34■■□□□ 1.17
CPNE1-223ENST00000475146 DNAJB8Q8NHS0 232 aa22.34■■□□□ 1.17
CPNE1-223ENST00000475146 RDH11Q8TC12 318 aa22.34■■□□□ 1.17
CPNE1-223ENST00000475146 UCN3Q969E3 161 aa22.34■■□□□ 1.17
CPNE1-223ENST00000475146 CAVIN3Q969G5 261 aa22.34■■□□□ 1.17
CPNE1-223ENST00000475146 PELOQ9BRX2 385 aaKnown RBP22.34■■□□□ 1.17
CPNE1-223ENST00000475146 MID1IP1Q9NPA3 183 aa22.34■■□□□ 1.17
CPNE1-223ENST00000475146 SEMA7AO75326 666 aa22.33■■□□□ 1.17
CPNE1-223ENST00000475146 ULK1O75385 1050 aa22.33■■□□□ 1.17
CPNE1-223ENST00000475146 CPA3P15088 417 aa22.33■■□□□ 1.17
CPNE1-223ENST00000475146 HTR6P50406 440 aa22.33■■□□□ 1.17
CPNE1-223ENST00000475146 NAGLUP54802 743 aa22.33■■□□□ 1.17
CPNE1-223ENST00000475146 SLC18A2Q05940 514 aa22.33■■□□□ 1.17
CPNE1-223ENST00000475146 GALNT1Q10472 559 aaPredicted RBP22.33■■□□□ 1.17
CPNE1-223ENST00000475146 CSTF3Q12996 717 aaKnown RBP22.33■■□□□ 1.17
CPNE1-223ENST00000475146 NDUFAF5Q5TEU4 345 aa22.33■■□□□ 1.17
CPNE1-223ENST00000475146 ST13P4Q8IZP2 240 aaPredicted RBP22.33■■□□□ 1.17
CPNE1-223ENST00000475146 C1orf52Q8N6N3 182 aaKnown RBP22.33■■□□□ 1.17
CPNE1-223ENST00000475146 DOK4Q8TEW6 326 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms