RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 PCDHB11Q9Y5F2 797 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 A0A1W2PRV1 198 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 SMIM30A4D0T7 59 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 SPATA31C2B4DYI2 1134 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 H3BNH8 94 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 PIK3R2O00459 728 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 RGS5O15539 181 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 MFAP3LO75121 409 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 DDAH2O95865 285 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 SNRPB2P08579 225 aaKnown RBP4.64□□□□□ -1.67
NPHP3-206ENST00000474871 SNRPCP09234 159 aaKnown RBP4.64□□□□□ -1.67
NPHP3-206ENST00000474871 SLC35E2BP0CK96 405 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 SLC35E2P0CK97 266 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 ADORA3P0DMS8 318 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 FGFR1P11362 822 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 BMP4P12644 408 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 FOLR2P14207 255 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 HLA-GP17693 338 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 CD1BP29016 333 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 C21orf33P30042 268 aaPredicted RBP4.64□□□□□ -1.67
NPHP3-206ENST00000474871 BOP1Q14137 746 aaKnown RBP4.64□□□□□ -1.67
NPHP3-206ENST00000474871 SLBPQ14493 270 aaKnown RBP eCLIP4.64□□□□□ -1.67
NPHP3-206ENST00000474871 OR8G1Q15617 311 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 CYP1B1Q16678 543 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 DNLZQ5SXM8 178 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 LRRC66Q68CR7 880 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 DESI1Q6ICB0 168 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 REEP3Q6NUK4 255 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 TTC27Q6P3X3 843 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 ATG14Q6ZNE5 492 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 KCTD1Q719H9 257 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 CENPUQ71F23 418 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 PAQR7Q86WK9 346 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 TUSC5Q8IXB3 177 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 ZZZ3Q8IYH5 903 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 CCDC105Q8IYK2 499 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 UBE2J2Q8N2K1 259 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 TMEM132CQ8N3T6 1108 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 C1orf162Q8NEQ5 155 aaPredicted RBP4.64□□□□□ -1.67
NPHP3-206ENST00000474871 OR4K14Q8NGD5 310 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 TSEN15Q8WW01 171 aaKnown RBP4.64□□□□□ -1.67
NPHP3-206ENST00000474871 THRSPQ92748 146 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 PLD4Q96BZ4 506 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 TPD52L3Q96J77 140 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 SPATA33Q96N06 139 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 NECAB3Q96P71 396 aaPredicted RBP4.64□□□□□ -1.67
NPHP3-206ENST00000474871 MSTO1Q9BUK6 570 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 NXF3Q9H4D5 531 aaKnown RBP4.64□□□□□ -1.67
NPHP3-206ENST00000474871 CHODLQ9H9P2 273 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 RNF122Q9H9V4 155 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 MED9Q9NWA0 146 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 SPHK1Q9NYA1 384 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 LRFN1Q9P244 771 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 NCDNQ9UBB6 729 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 PCYOX1Q9UHG3 505 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 PARP14Q460N5 1801 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 ATAD5Q96QE3 1844 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 POC1B-GALNT4F8VUJ3 575 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 F8WDY8 70 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 RNF225M0QZC1 329 aaPredicted RBP4.64□□□□□ -1.67
NPHP3-206ENST00000474871 B4GALT5O43286 388 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 ASNA1O43681 348 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 SUSD5O60279 629 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 OR10H2O60403 315 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 TUSC2O75896 110 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 AKAP3O75969 853 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 KRT37O76014 449 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 F13BP05160 661 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 LBPP18428 481 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 FGFR3P22607 806 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 RFC3P40938 356 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 JAG1P78504 1218 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 FKBP3Q00688 224 aaKnown RBP4.64□□□□□ -1.67
NPHP3-206ENST00000474871 BST2Q10589 180 aaKnown RBP4.64□□□□□ -1.67
NPHP3-206ENST00000474871 MED21Q13503 144 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 EFHC2Q5JST6 749 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 VWA1Q6PCB0 445 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 TMPRSS11FQ6ZWK6 438 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 ABHD12BQ7Z5M8 362 aaPredicted RBP4.64□□□□□ -1.67
NPHP3-206ENST00000474871 CUZD1Q86UP6 607 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 PIGZQ86VD9 579 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 CYP4Z1Q86W10 505 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 LRRC17Q8N6Y2 441 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 RASGEF1AQ8N9B8 481 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 CXorf40AQ8TE69 158 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 C10orf82Q8WW14 230 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 FAF2Q96CS3 445 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 G6PC3Q9BUM1 346 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF70Q9UC06 446 aaPredicted RBP4.64□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF221Q9UK13 617 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 FNDC3AQ9Y2H6 1198 aaKnown RBP4.64□□□□□ -1.67
NPHP3-206ENST00000474871 TBL2Q9Y4P3 447 aaKnown RBP4.64□□□□□ -1.67
NPHP3-206ENST00000474871 SAR1BQ9Y6B6 198 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 LOC105371242A0A075B767 164 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 TCAF2A6NFQ2 919 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 BLOC1S5-TXNDC5H3BN57 136 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 TDP2O95551 362 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 LDLRP01130 860 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 IFNA10P01566 189 aa4.64□□□□□ -1.67
NPHP3-206ENST00000474871 TRAPPC2P0DI81 140 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms