RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 SLC6A15Q9H2J7 730 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 EXO5Q9H790 373 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 PELI2Q9HAT8 420 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 PROK2Q9HC23 129 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 ZFP64Q9NPA5 681 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 ACKR4Q9NPB9 350 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 C20orf96Q9NUD7 363 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 TAS2R13Q9NYV9 303 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 ADAM21Q9UKJ8 722 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 FBXO5Q9UKT4 447 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 CLCA3PQ9Y6N3 262 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 MYOCOSA0A1B0GUC4 107 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 MAGEB16A2A368 324 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 ANKRD33BA6NCL7 494 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 LRIT2A6NDA9 550 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 PABPN1LA6NDY0 278 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 SDR42E2A6NKP2 422 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 AHRRA9YTQ3 701 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 C17orf105B2RV13 164 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 EEF1E1-BLOC1S5C9J1V9 151 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 INAFM1C9JVW0 142 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 EEF1E1O43324 174 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 B3GALT2O43825 422 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 ETHE1O95571 254 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 GUCA1CO95843 209 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 EPPINO95925 133 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 TBX6O95947 436 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 IGHA1P01876 353 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 IFNA16P05015 189 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 HIST1H2AGP0C0S8 130 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 MLNP12872 115 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 HIST1H2ADP20671 130 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 SAT1P21673 171 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 CERS1P27544 350 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 GABRB3P28472 473 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 TRPC1P48995 793 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 VPS41P49754 854 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 PGGT1BP53609 377 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 TERF1P54274 439 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 LIM2P55344 173 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 STXBP1P61764 594 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 KCNJ2P63252 427 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 SARNPP82979 210 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 CRYZQ08257 329 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 POU4F2Q12837 409 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 RBBP5Q15291 538 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 POU4F3Q15319 338 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 TRIP13Q15645 432 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 PPP1R3AQ16821 1122 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 MPEG1Q2M385 716 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 ADPRMQ3LIE5 342 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 HSP90AA5PQ58FG0 334 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 PIGGQ5H8A4 983 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 PRAMEF20Q5VT98 475 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 SLC22A10Q63ZE4 541 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 NSUN5P2Q63ZY6 315 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 SBSNQ6UWP8 590 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 THOC6Q86W42 341 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 TMEM139Q8IV31 216 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 KLHDC8AQ8IYD2 350 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 LRRC75A-AS1Q8N1F1 130 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 DEPDC4Q8N2C3 294 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 C2CD4AQ8NCU7 369 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 OR10G3Q8NGC4 313 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 NUBPLQ8TB37 319 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 ATL1Q8WXF7 558 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 SMPDL3BQ92485 455 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 KIAA1191Q96A73 305 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 MS4A6EQ96DS6 147 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 SPACA9Q96E40 222 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 FAR2Q96K12 515 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 HIST1H2AHQ96KK5 128 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 Q96MF0 132 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 SERPINB12Q96P63 405 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 HIST1H2AJQ99878 128 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 WDR83Q9BRX9 315 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 YIPF4Q9BSR8 244 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 DESI2Q9BSY9 194 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 FAM167BQ9BTA0 163 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 H2AFJQ9BTM1 129 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 TRIM5Q9C035 493 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 PRDM14Q9GZV8 571 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 TSPY26PQ9H489 355 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 XAB2Q9HCS7 855 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 QPCTLQ9NXS2 382 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 JKAMPQ9P055 326 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 VTI1BQ9UEU0 232 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 EGFL7Q9UHF1 273 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 IKZF3Q9UKT9 509 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 BOKQ9UMX3 212 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 DAPP1Q9UN19 280 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 MRPS33Q9Y291 106 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 ZKSCAN5Q9Y2L8 839 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 MAD1L1Q9Y6D9 718 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 CHCHD2Q9Y6H1 151 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 NCKAP5O14513 1909 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 KIAA1549Q9HCM3 1950 aa4.71□□□□□ -1.66
SNRNP40-204ENST00000474025 MED12Q93074 2177 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 A0A088AWK7 358 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms