RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 SERPINE1P05121 402 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 CHRNGP07510 517 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 CELA2AP08217 269 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 CHN1P15882 459 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 PLIN5Q00G26 463 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 FOLH1Q04609 750 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 CHI3L2Q15782 390 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 MEP1AQ16819 746 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 SH2D4BQ5SQS7 431 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 NDUFAF5Q5TEU4 345 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 CLEC6AQ6EIG7 209 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 IGFL3Q6UXB1 125 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 TRIM46Q7Z4K8 759 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 DDIASQ8IXT1 998 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 OR4K14Q8NGD5 310 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 OR14A16Q8NHC5 309 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 SUN3Q8TAQ9 357 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 DNAJB14Q8TBM8 379 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 AGR3Q8TD06 166 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 ANKRD9Q96BM1 317 aaPredicted RBP12.86□□□□□ -0.35
USF1-205ENST00000473969 VMP1Q96GC9 406 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 ART5Q96L15 291 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 ILKAPQ9H0C8 392 aaPredicted RBP12.86□□□□□ -0.35
USF1-205ENST00000473969 PCSK5Q92824 1860 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 TMEM120BA0PK00 339 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 C17orf105B2RV13 164 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 TMEM114B3SHH9 223 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 SUV39H1O43463 412 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 SEC22BO75396 215 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 PRKRAO75569 313 aaKnown RBP12.85□□□□□ -0.35
USF1-205ENST00000473969 RSL1D1O76021 490 aaKnown RBP12.85□□□□□ -0.35
USF1-205ENST00000473969 SNUPNO95149 360 aaKnown RBP12.85□□□□□ -0.35
USF1-205ENST00000473969 FGF4P08620 206 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 ALOX15P16050 662 aaPredicted RBP12.85□□□□□ -0.35
USF1-205ENST00000473969 GRK2P25098 689 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 GSTM5P46439 218 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 STT3AP46977 705 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 ALDH9A1P49189 494 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 HEPACAMQ14CZ8 416 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 AGBL2Q5U5Z8 902 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 KIRREL3Q8IZU9 778 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 MORN4Q8NDC4 146 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 MGARPQ8TDB4 240 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 ELP5Q8TE02 316 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 PSMF1Q92530 271 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 NCLNQ969V3 563 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 PNPLA2Q96AD5 504 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 APIPQ96GX9 242 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 METTL2AQ96IZ6 378 aaKnown RBP12.85□□□□□ -0.35
USF1-205ENST00000473969 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.85□□□□□ -0.35
USF1-205ENST00000473969 TEX10Q9NXF1 929 aaPredicted RBP12.85□□□□□ -0.35
USF1-205ENST00000473969 COPS7AQ9UBW8 275 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 B3GNT3Q9Y2A9 372 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 LOC400499M0QZD8 3231 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 NUP210LQ5VU65 1888 aa12.85□□□□□ -0.35
USF1-205ENST00000473969 MED13Q9UHV7 2174 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 TRBV11-1A0A0K0K1C0 115 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 TTLL8A6PVC2 850 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 TGFBR3LH3BV60 316 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 FCHO1O14526 889 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 PGRMC2O15173 223 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 ERAL1O75616 437 aaKnown RBP12.84□□□□□ -0.35
USF1-205ENST00000473969 ZFAND5O76080 213 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 ANXA4P09525 319 aaPredicted RBP12.84□□□□□ -0.35
USF1-205ENST00000473969 LINC00032P0C843 101 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 DRD2P14416 443 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 TIA1P31483 386 aaKnown RBP eCLIP12.84□□□□□ -0.35
USF1-205ENST00000473969 SOX11P35716 441 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 CASRP41180 1078 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 ABCE1P61221 599 aaKnown RBP12.84□□□□□ -0.35
USF1-205ENST00000473969 IGLV3-21P80748 117 aaPredicted RBP12.84□□□□□ -0.35
USF1-205ENST00000473969 STX3Q13277 289 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 TLR1Q15399 786 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 NR6A1Q15406 480 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 NADK2Q4G0N4 442 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 ACER2Q5QJU3 275 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 FAM219BQ5XKK7 198 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 KANK2Q63ZY3 851 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 B3GNTL1Q67FW5 361 aaPredicted RBP12.84□□□□□ -0.35
USF1-205ENST00000473969 FCRLBQ6BAA4 426 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 H3F3CQ6NXT2 135 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 IGFL2Q6UWQ7 119 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 RPS19BP1Q86WX3 136 aaKnown RBP12.84□□□□□ -0.35
USF1-205ENST00000473969 TRIM42Q8IWZ5 723 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 ST13P4Q8IZP2 240 aaPredicted RBP12.84□□□□□ -0.35
USF1-205ENST00000473969 RBMXL3Q8N7X1 1067 aaKnown RBP12.84□□□□□ -0.35
USF1-205ENST00000473969 NFAM1Q8NET5 270 aaPredicted RBP12.84□□□□□ -0.35
USF1-205ENST00000473969 CDC26Q8NHZ8 85 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 FAM76AQ8TAV0 307 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 TWIST2Q8WVJ9 160 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 TM4SF18Q96CE8 201 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 CCT7Q99832 543 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 EBPLQ9BY08 206 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 OR8D2Q9GZM6 311 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 ACBD3Q9H3P7 528 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 CDCP1Q9H5V8 836 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 VIPAS39Q9H9C1 493 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 LRTM1Q9HBL6 345 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 ZBTB20Q9HC78 741 aaPredicted RBP12.84□□□□□ -0.35
USF1-205ENST00000473969 TNFRSF12AQ9NP84 129 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms