RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 HCFC1P51610 2035 aa17.41■□□□□ 0.38
CCDC88B-206ENST00000473405 A0A096LPK6 155 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 FAM166BA8MTA8 275 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 G3V3Y1 287 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 HRKO00198 91 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 PRKRAO75569 313 aaKnown RBP17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 GLSO94925 669 aaPredicted RBP17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 KLHL2O95198 593 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 IGKV3-11P04433 115 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 GFAPP14136 432 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 TNNI3P19429 210 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 KIR3DL1P43629 444 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 STT3AP46977 705 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 HNRNPH2P55795 449 aaKnown RBP17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 TNFRSF17Q02223 184 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 ACAP2Q15057 778 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 ZNF750Q32MQ0 723 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 EMC4Q5J8M3 183 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 LIPJQ5W064 366 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 C18orf63Q68DL7 685 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 ARHGAP11AQ6P4F7 1023 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 MYLK4Q86YV6 388 aaPredicted RBP17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 C9orf40Q8IXQ3 194 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 ZNF295-AS1Q8N0V1 137 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 ZCCHC7Q8N3Z6 543 aaKnown RBP17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 RGMAQ96B86 450 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 TTTY12Q9BZ98 90 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 ACSS3Q9H6R3 686 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 RPF2Q9H7B2 306 aaKnown RBP17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 ZDHHC11Q9H8X9 412 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 ACTR8Q9H981 624 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 NINJ2Q9NZG7 142 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 COPS7AQ9UBW8 275 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 ATG4BQ9Y4P1 393 aa17.4■□□□□ 0.38
CCDC88B-206ENST00000473405 H0YIV9 168 aa17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 PDE9AO76083 593 aa17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 SERPINB8P50452 374 aa17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 RAP1GDS1P52306 607 aa17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 RPS13P62277 151 aaKnown RBP17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 PPIAP62937 165 aaKnown RBP17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 FOLH1Q04609 750 aa17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 PCBP2Q15366 365 aaKnown RBP eCLIP17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 RTL4Q6ZR62 310 aa17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 GOLGA7Q7Z5G4 137 aa17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 GPR180Q86V85 440 aa17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 EID3Q8N140 333 aa17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 GOLM1Q8NBJ4 401 aa17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 ACBD4Q8NC06 268 aa17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 SENP5Q96HI0 755 aaPredicted RBP17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 DEFB127Q9H1M4 99 aa17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 PRM3Q9NNZ6 103 aa17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 MS4A12Q9NXJ0 267 aa17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 PHF11Q9UIL8 331 aa17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 ANGPTL3Q9Y5C1 460 aa17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 PCDHGA11Q9Y5H2 935 aa17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 EXPH5Q8NEV8 1989 aa17.39■□□□□ 0.37
CCDC88B-206ENST00000473405 F8P00451 2351 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 A0A0A6YYD5 115 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 UGDHO60701 494 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 EEDO75530 441 aaKnown RBP17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 SIX3O95343 332 aaPredicted RBP17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 CCL3P10147 92 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 COX7A2P14406 83 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 ARFIP1P53367 373 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 PLIN5Q00G26 463 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 CKAP4Q07065 602 aaKnown RBP17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 GTF2H2Q13888 395 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 UAP1Q16222 522 aaPredicted RBP17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 MPEG1Q2M385 716 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 TECRLQ5HYJ1 363 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 MRM1Q6IN84 353 aaKnown RBP17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 GTF2H2CQ6P1K8 395 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 RPRMLQ8N4K4 120 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 OR5L2Q8NGL0 311 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 NUBPLQ8TB37 319 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 WDR20Q8TBZ3 569 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 TANKQ92844 425 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 PPWD1Q96BP3 646 aaKnown RBP17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 SDCCAG3Q96C92 435 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 FBXL20Q96IG2 436 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 SGCZQ96LD1 299 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 DGAT2Q96PD7 388 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 FAM173AQ9BQD7 235 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 LIPGQ9Y5X9 500 aa17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 INTS1Q8N201 2190 aaKnown RBP17.38■□□□□ 0.37
CCDC88B-206ENST00000473405 NF1P21359 2839 aa17.37■□□□□ 0.37
CCDC88B-206ENST00000473405 WASHC1A8K0Z3 465 aa17.37■□□□□ 0.37
CCDC88B-206ENST00000473405 ACOT7O00154 380 aa17.37■□□□□ 0.37
CCDC88B-206ENST00000473405 PROM1O43490 865 aa17.37■□□□□ 0.37
CCDC88B-206ENST00000473405 TMPRSS11DO60235 418 aa17.37■□□□□ 0.37
CCDC88B-206ENST00000473405 BSGP35613 385 aa17.37■□□□□ 0.37
CCDC88B-206ENST00000473405 MAGEA12P43365 314 aa17.37■□□□□ 0.37
CCDC88B-206ENST00000473405 PLGLB1Q02325 96 aa17.37■□□□□ 0.37
CCDC88B-206ENST00000473405 FOXO1Q12778 655 aa17.37■□□□□ 0.37
CCDC88B-206ENST00000473405 ASPHQ12797 758 aa17.37■□□□□ 0.37
CCDC88B-206ENST00000473405 CUL3Q13618 768 aa17.37■□□□□ 0.37
CCDC88B-206ENST00000473405 CPSF6Q16630 551 aaKnown RBP eCLIP17.37■□□□□ 0.37
CCDC88B-206ENST00000473405 PIGGQ5H8A4 983 aa17.37■□□□□ 0.37
CCDC88B-206ENST00000473405 KLC3Q6P597 504 aa17.37■□□□□ 0.37
CCDC88B-206ENST00000473405 ADGRD1Q6QNK2 874 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms