RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 FOLH1Q04609 750 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 PCDH1Q08174 1060 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 TRAF3Q13114 568 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 BIKQ13323 160 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 E2F2Q14209 437 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 RASA2Q15283 850 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 C10orf62Q5T681 223 aaPredicted RBP10.74□□□□□ -0.69
CPNE1-222ENST00000473373 C18orf63Q68DL7 685 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 TIFABQ6ZNK6 161 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 GPRIN3Q6ZVF9 776 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.74□□□□□ -0.69
CPNE1-222ENST00000473373 FJX1Q86VR8 437 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 ZCCHC7Q8N3Z6 543 aaKnown RBP10.74□□□□□ -0.69
CPNE1-222ENST00000473373 CDYL2Q8N8U2 506 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 MORN4Q8NDC4 146 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 NFAM1Q8NET5 270 aaPredicted RBP10.74□□□□□ -0.69
CPNE1-222ENST00000473373 OR5L2Q8NGL0 311 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 WDR20Q8TBZ3 569 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 SLC2A12Q8TD20 617 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 TANKQ92844 425 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 CCDC126Q96EE4 140 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 MAGED4Q96JG8 741 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 TAAR6Q96RI8 345 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 NPAS2Q99743 824 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 PELOQ9BRX2 385 aaKnown RBP10.74□□□□□ -0.69
CPNE1-222ENST00000473373 LIN28AQ9H9Z2 209 aaKnown RBP10.74□□□□□ -0.69
CPNE1-222ENST00000473373 PPCSQ9HAB8 311 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 TIMMDC1Q9NPL8 285 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.74□□□□□ -0.69
CPNE1-222ENST00000473373 KCMF1Q9P0J7 381 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 SUCOQ9UBS9 1254 aaKnown RBP10.74□□□□□ -0.69
CPNE1-222ENST00000473373 VTI1BQ9UEU0 232 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 FETUBQ9UGM5 382 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 YARS2Q9Y2Z4 477 aaKnown RBP10.74□□□□□ -0.69
CPNE1-222ENST00000473373 TSC22D4Q9Y3Q8 395 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 UNC79Q9P2D8 2635 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 NOTCH2Q04721 2471 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 NINQ8N4C6 2090 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 ICE1Q9Y2F5 2266 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 SPTAN1Q13813 2472 aaKnown RBP10.73□□□□□ -0.69
CPNE1-222ENST00000473373 A0A1B0GUH1 482 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 ENO4A6NNW6 628 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 NPIPA5E9PKD4 350 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 KLRC4-KLRK1H3BQV0 150 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 COPEO14579 308 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 TFECO14948 347 aaPredicted RBP10.73□□□□□ -0.69
CPNE1-222ENST00000473373 LRRTM2O43300 516 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 FGF17O60258 216 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 EEDO75530 441 aaKnown RBP10.73□□□□□ -0.69
CPNE1-222ENST00000473373 PRKRAO75569 313 aaKnown RBP10.73□□□□□ -0.69
CPNE1-222ENST00000473373 OR2J2O76002 312 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 SEMA3DO95025 777 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 SCELO95171 688 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 DDAH2O95865 285 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 PDYNP01213 254 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 ALOX15P16050 662 aaPredicted RBP10.73□□□□□ -0.69
CPNE1-222ENST00000473373 ZNF24P17028 368 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 STT3AP46977 705 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 ALDH9A1P49189 494 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 HLCSP50747 726 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 ARFIP1P53367 373 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 PLGLB1Q02325 96 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 IMPG1Q17R60 797 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 GGTA1PQ4G0N0 100 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 ZNF678Q5SXM1 525 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 C1QL3Q5VWW1 255 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 HLA-DQA1Q5Y7H0 255 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 ZNF787Q6DD87 383 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 OR52E8Q6IFG1 317 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 IL20RBQ6UXL0 311 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 SLC29A4Q7RTT9 530 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 EIF1ADQ8N9N8 165 aaKnown RBP10.73□□□□□ -0.69
CPNE1-222ENST00000473373 APCDD1LQ8NCL9 501 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 MDS2Q8NDY4 140 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 METTL6Q8TCB7 284 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 EPS8L3Q8TE67 593 aaKnown RBP10.73□□□□□ -0.69
CPNE1-222ENST00000473373 ZNF483Q8TF39 744 aaPredicted RBP10.73□□□□□ -0.69
CPNE1-222ENST00000473373 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.73□□□□□ -0.69
CPNE1-222ENST00000473373 PPWD1Q96BP3 646 aaKnown RBP10.73□□□□□ -0.69
CPNE1-222ENST00000473373 GAL3ST4Q96RP7 486 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 HBEGFQ99075 208 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 MRPL1Q9BYD6 325 aaKnown RBP10.73□□□□□ -0.69
CPNE1-222ENST00000473373 L2HGDHQ9H9P8 463 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 ZBTB26Q9HCK0 441 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 TRPS1Q9UHF7 1281 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 MID2Q9UJV3 735 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 NPIPA1Q9UND3 350 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 ATG4BQ9Y4P1 393 aa10.73□□□□□ -0.69
CPNE1-222ENST00000473373 SPENQ96T58 3664 aaKnown RBP10.72□□□□□ -0.69
CPNE1-222ENST00000473373 A0A0A6YYD5 115 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 A0A1W2PPM1 405 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 CDK2AP1O14519 115 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 PROM1O43490 865 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 DLX3O60479 287 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 CDC40O60508 579 aaKnown RBP eCLIP10.72□□□□□ -0.69
CPNE1-222ENST00000473373 ETHE1O95571 254 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 AIFM1O95831 613 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 SHBGP04278 402 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 ESRRAP11474 423 aaPredicted RBP10.72□□□□□ -0.69
CPNE1-222ENST00000473373 ABOP16442 354 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms