RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 TMPRSS11AQ6ZMR5 421 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 OLIG3Q7RTU3 272 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 VN1R5Q7Z5H4 357 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 HMGN2P46Q86SG4 172 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 RBM45Q8IUH3 476 aaKnown RBP20.09■□□□□ 0.81
COL18A1-207ENST00000473212 DSPPQ9NZW4 1301 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 REV1Q9UBZ9 1251 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 AGRPO00253 132 aa20.08■□□□□ 0.81
COL18A1-207ENST00000473212 SEMA3DO95025 777 aa20.08■□□□□ 0.81
COL18A1-207ENST00000473212 SOD1P00441 154 aa20.08■□□□□ 0.81
COL18A1-207ENST00000473212 SRPRAP08240 638 aaKnown RBP20.08■□□□□ 0.81
COL18A1-207ENST00000473212 CRYBB2P43320 205 aa20.08■□□□□ 0.81
COL18A1-207ENST00000473212 E2F2Q14209 437 aa20.08■□□□□ 0.81
COL18A1-207ENST00000473212 SEC23BQ15437 767 aa20.08■□□□□ 0.81
COL18A1-207ENST00000473212 SPHARQ15513 63 aa20.08■□□□□ 0.81
COL18A1-207ENST00000473212 PARS2Q7L3T8 475 aaKnown RBP20.08■□□□□ 0.81
COL18A1-207ENST00000473212 KLHL6Q8WZ60 621 aa20.08■□□□□ 0.81
COL18A1-207ENST00000473212 RAB8BQ92930 207 aa20.08■□□□□ 0.81
COL18A1-207ENST00000473212 DMRTB1Q96MA1 342 aa20.08■□□□□ 0.81
COL18A1-207ENST00000473212 UCK2Q9BZX2 261 aa20.08■□□□□ 0.81
COL18A1-207ENST00000473212 MYNNQ9NPC7 610 aa20.08■□□□□ 0.81
COL18A1-207ENST00000473212 FZD3Q9NPG1 666 aa20.08■□□□□ 0.81
COL18A1-207ENST00000473212 ASAH2Q9NR71 780 aa20.08■□□□□ 0.81
COL18A1-207ENST00000473212 TAAR2Q9P1P5 351 aa20.08■□□□□ 0.81
COL18A1-207ENST00000473212 KCND3Q9UK17 655 aa20.08■□□□□ 0.81
COL18A1-207ENST00000473212 SNX11Q9Y5W9 270 aa20.08■□□□□ 0.81
COL18A1-207ENST00000473212 LRRK1Q38SD2 2015 aa20.08■□□□□ 0.81
COL18A1-207ENST00000473212 MTCL1Q9Y4B5 1905 aaKnown RBP20.08■□□□□ 0.81
COL18A1-207ENST00000473212 ARRDC5A6NEK1 342 aa20.08■□□□□ 0.8
COL18A1-207ENST00000473212 PSMA1P25786 263 aaKnown RBP20.08■□□□□ 0.8
COL18A1-207ENST00000473212 RORCP51449 518 aa20.08■□□□□ 0.8
COL18A1-207ENST00000473212 NTHL1P78549 312 aa20.08■□□□□ 0.8
COL18A1-207ENST00000473212 TAP2Q03519 686 aa20.08■□□□□ 0.8
COL18A1-207ENST00000473212 ZNF79Q15937 498 aa20.08■□□□□ 0.8
COL18A1-207ENST00000473212 CELF5Q8N6W0 485 aaKnown RBP20.08■□□□□ 0.8
COL18A1-207ENST00000473212 SETD6Q8TBK2 473 aa20.08■□□□□ 0.8
COL18A1-207ENST00000473212 TIFAQ96CG3 184 aa20.08■□□□□ 0.8
COL18A1-207ENST00000473212 TMEM80Q96HE8 168 aa20.08■□□□□ 0.8
COL18A1-207ENST00000473212 TIGARQ9NQ88 270 aa20.08■□□□□ 0.8
COL18A1-207ENST00000473212 H3BN98 237 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 FOXE1O00358 373 aaPredicted RBP20.07■□□□□ 0.8
COL18A1-207ENST00000473212 UGT2B17O75795 530 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 OSMP13725 252 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 TAB1Q15750 504 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 REEP3Q6NUK4 255 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 PAQR6Q6TCH4 344 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 KREMEN2Q8NCW0 462 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 UCN3Q969E3 161 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 SPHK2Q9NRA0 654 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 GRIP1Q9Y3R0 1128 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 DYRK1BQ9Y463 629 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 PCDHGB2Q9Y5G2 931 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 KPNA3O00505 521 aaPredicted RBP20.07■□□□□ 0.8
COL18A1-207ENST00000473212 HBQ1P09105 142 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 C1GALT1C1LP0DN25 315 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 MMP12P39900 470 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 SNRPGP62308 76 aaKnown RBP20.07■□□□□ 0.8
COL18A1-207ENST00000473212 MXD1Q05195 221 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 NFE2L1Q14494 772 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 ZNF658BQ4V348 819 aaPredicted RBP20.07■□□□□ 0.8
COL18A1-207ENST00000473212 THOC7Q6I9Y2 204 aaKnown RBP20.07■□□□□ 0.8
COL18A1-207ENST00000473212 CEACAM20Q6UY09 585 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 TRMT11Q7Z4G4 463 aaKnown RBP20.07■□□□□ 0.8
COL18A1-207ENST00000473212 RAB43Q86YS6 212 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 ST6GAL2Q96JF0 529 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 ZSWIM3Q96MP5 696 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 IL36AQ9UHA7 158 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 TMCC3Q9ULS5 477 aa20.07■□□□□ 0.8
COL18A1-207ENST00000473212 ANTXRLA6NF34 631 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 QSOX1O00391 747 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 TFECO14948 347 aaPredicted RBP20.06■□□□□ 0.8
COL18A1-207ENST00000473212 OR10H3O60404 316 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 MOSPD3O75425 235 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 BCHEP06276 602 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 PTGER1P34995 402 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 RPL3P39023 403 aaKnown RBP20.06■□□□□ 0.8
COL18A1-207ENST00000473212 PNLIPRP1P54315 467 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 ZFP69Q49AA0 526 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 HORMAD2Q8N7B1 307 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 FAM83CQ9BQN1 747 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 POLR2J2Q9GZM3 115 aaKnown RBP20.06■□□□□ 0.8
COL18A1-207ENST00000473212 MIEF1Q9NQG6 463 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 SEC14L4Q9UDX3 406 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 FAM172BPA6NC97 362 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 SPINT1O43278 529 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 FGF18O76093 207 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 TBX6O95947 436 aaPredicted RBP20.06■□□□□ 0.8
COL18A1-207ENST00000473212 ADAP00813 363 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 CYP17A1P05093 508 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 IL7P13232 177 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 PSPHP78330 225 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 MRPS15P82914 257 aaKnown RBP20.06■□□□□ 0.8
COL18A1-207ENST00000473212 LSM11P83369 360 aaKnown RBP eCLIP20.06■□□□□ 0.84e-8■□□□□ 8.9
COL18A1-207ENST00000473212 COL9A2Q14055 689 aaPredicted RBP20.06■□□□□ 0.8
COL18A1-207ENST00000473212 LIPKQ5VXJ0 399 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 ZNF547Q8IVP9 402 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 APOBEC4Q8WW27 367 aaKnown RBP20.06■□□□□ 0.8
COL18A1-207ENST00000473212 OTUB1Q96FW1 271 aaPredicted RBP20.06■□□□□ 0.8
COL18A1-207ENST00000473212 SLC6A18Q96N87 628 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 EFCAB11Q9BUY7 163 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms