RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 PAPD4Q6PIY7 484 aaKnown RBP12.27□□□□□ -0.45
TPM3-216ENST00000473036 GPR180Q86V85 440 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 ZNF595Q8IYB9 648 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 KIF2BQ8N4N8 673 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 C1orf52Q8N6N3 182 aaKnown RBP12.27□□□□□ -0.45
TPM3-216ENST00000473036 RBMXL3Q8N7X1 1067 aaKnown RBP12.27□□□□□ -0.45
TPM3-216ENST00000473036 CLEC1AQ8NC01 280 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 OR2T11Q8NH01 316 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 BRIX1Q8TDN6 353 aaKnown RBP12.27□□□□□ -0.45
TPM3-216ENST00000473036 LRRC8CQ8TDW0 803 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 METTL21AQ8WXB1 218 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 ROGDIQ9GZN7 287 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 PRM3Q9NNZ6 103 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 VPS29Q9UBQ0 182 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 ZDHHC2Q9UIJ5 367 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 MMACHCQ9Y4U1 282 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 CROCCQ5TZA2 2017 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 CENPEQ02224 2701 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 TMEM114B3SHH9 223 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 PCDH17O14917 1159 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 AIFM1O95831 613 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 SERPINE1P05121 402 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 SERPINA7P05543 415 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 UROSP10746 265 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 HSD3B1P14060 373 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 CPN2P22792 545 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 HSD3B2P26439 372 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 SOX11P35716 441 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 MDH1P40925 334 aaKnown RBP12.26□□□□□ -0.45
TPM3-216ENST00000473036 ST13P50502 369 aaKnown RBP12.26□□□□□ -0.45
TPM3-216ENST00000473036 HSD17B7P56937 341 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 SLC26A5P58743 744 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 IGLV3-21P80748 117 aaPredicted RBP12.26□□□□□ -0.45
TPM3-216ENST00000473036 CSTF3Q12996 717 aaKnown RBP12.26□□□□□ -0.45
TPM3-216ENST00000473036 RCN2Q14257 317 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 KANK2Q63ZY3 851 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 PLAG1Q6DJT9 500 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 Q6ZSR9 355 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 TRIM46Q7Z4K8 759 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 NUDT13Q86X67 352 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 SIRT6Q8N6T7 355 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 EFCAB3Q8N7B9 438 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 ZNF321PQ8N8H1 164 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 TEX19Q8NA77 164 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 GALNT11Q8NCW6 608 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 MGARPQ8TDB4 240 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 TM4SF18Q96CE8 201 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 MAGEB18Q96M61 343 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 TUBB6Q9BUF5 446 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 LHPPQ9H008 270 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 MANSC1Q9H8J5 431 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 PFDN4Q9NQP4 134 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 C5AR2Q9P296 337 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 ZNF223Q9UK11 482 aaPredicted RBP12.26□□□□□ -0.45
TPM3-216ENST00000473036 ADAM29Q9UKF5 820 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 CES1P1Q9UKY3 287 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.26□□□□□ -0.45
TPM3-216ENST00000473036 DNAJC15Q9Y5T4 150 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 ITPR2Q14571 2701 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 CREBBPQ92793 2442 aa12.26□□□□□ -0.45
TPM3-216ENST00000473036 RP1L1Q8IWN7 2480 aaPredicted RBP12.26□□□□□ -0.45
TPM3-216ENST00000473036 HRKO00198 91 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 AZIN1O14977 448 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 FGF4P08620 206 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 BGNP21810 368 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 HK2P52789 917 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 FOLH1Q04609 750 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 BTKQ06187 659 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 SLC13A2Q13183 592 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 STX3Q13277 289 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 KIAA0040Q15053 153 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 CHI3L2Q15782 390 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 PRSS53Q2L4Q9 553 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 NADK2Q4G0N4 442 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 IGFL2Q6UWQ7 119 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 RGS9BPQ6ZS82 235 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 ASB18Q6ZVZ8 466 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 KBTBD2Q8IY47 623 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 Q8NA96 180 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 APCDD1LQ8NCL9 501 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 DNAJB14Q8TBM8 379 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 ELP5Q8TE02 316 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 ADAMTS18Q8TE60 1221 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 DOK4Q8TEW6 326 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 PTPMT1Q8WUK0 201 aaPredicted RBP12.25□□□□□ -0.45
TPM3-216ENST00000473036 CKAP2Q8WWK9 683 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 SORT1Q99523 831 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 ALOXE3Q9BYJ1 711 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 CCDC134Q9H6E4 229 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 RPF2Q9H7B2 306 aaKnown RBP12.25□□□□□ -0.45
TPM3-216ENST00000473036 RIC8BQ9NVN3 520 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 THAP1Q9NVV9 213 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 LYARQ9NX58 379 aaKnown RBP12.25□□□□□ -0.45
TPM3-216ENST00000473036 HEY2Q9UBP5 337 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 VTI1BQ9UEU0 232 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 PLEKHB1Q9UF11 243 aaPredicted RBP12.25□□□□□ -0.45
TPM3-216ENST00000473036 C19orf25Q9UFG5 118 aaPredicted RBP12.25□□□□□ -0.45
TPM3-216ENST00000473036 FIS1Q9Y3D6 152 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 TRAF6Q9Y4K3 522 aa12.25□□□□□ -0.45
TPM3-216ENST00000473036 SAGE2PA6NJ88 616 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms