RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 NMRK1Q9NWW6 199 aa8.55□□□□□ -1.04
SMC4-214ENST00000472991 LYARQ9NX58 379 aaKnown RBP8.55□□□□□ -1.04
SMC4-214ENST00000472991 VPS29Q9UBQ0 182 aa8.55□□□□□ -1.04
SMC4-214ENST00000472991 POLHQ9Y253 713 aa8.55□□□□□ -1.04
SMC4-214ENST00000472991 RAP2CQ9Y3L5 183 aa8.55□□□□□ -1.04
SMC4-214ENST00000472991 NUP214P35658 2090 aaPredicted RBP8.55□□□□□ -1.04
SMC4-214ENST00000472991 ATMQ13315 3056 aa8.55□□□□□ -1.04
SMC4-214ENST00000472991 ARHGAP10A1A4S6 786 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 CYR61O00622 381 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 SOCS6O14544 535 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 RGS14O43566 566 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 PCDH7O60245 1069 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 ALOX12BO75342 701 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 PRKRAO75569 313 aaKnown RBP8.54□□□□□ -1.04
SMC4-214ENST00000472991 RSL1D1O76021 490 aaKnown RBP8.54□□□□□ -1.04
SMC4-214ENST00000472991 SNUPNO95149 360 aaKnown RBP8.54□□□□□ -1.04
SMC4-214ENST00000472991 RECKO95980 971 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 IGHEP01854 428 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 JUNP05412 331 aaKnown RBP8.54□□□□□ -1.04
SMC4-214ENST00000472991 H2AFB1P0C5Y9 115 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 H2AFB2P0C5Z0 115 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 FAM58BPP0C7Q3 252 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 LINC00032P0C843 101 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 IL10P22301 178 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 CPN2P22792 545 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 RAE1P78406 368 aaKnown RBP8.54□□□□□ -1.04
SMC4-214ENST00000472991 BTG2P78543 158 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 RHAGQ02094 409 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 TNFRSF17Q02223 184 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 EEF1A2Q05639 463 aaKnown RBP8.54□□□□□ -1.04
SMC4-214ENST00000472991 ACSM2AQ08AH3 577 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 PDCD2Q16342 344 aaPredicted RBP8.54□□□□□ -1.04
SMC4-214ENST00000472991 DEFB109BQ30KR1 87 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 SPIN4Q56A73 249 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 XKR7Q5GH72 579 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 CCNYL2Q5T2Q4 361 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 ACSM2BQ68CK6 577 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 MRM1Q6IN84 353 aaKnown RBP8.54□□□□□ -1.04
SMC4-214ENST00000472991 QSOX2Q6ZRP7 698 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 RNF165Q6ZSG1 346 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 LANCL3Q6ZV70 420 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 GPR155Q7Z3F1 870 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 GPR180Q86V85 440 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 OR2T11Q8NH01 316 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 CHTF18Q8WVB6 975 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 SNRNP27Q8WVK2 155 aaKnown RBP8.54□□□□□ -1.04
SMC4-214ENST00000472991 ZNF75CPQ92670 426 aaPredicted RBP8.54□□□□□ -1.04
SMC4-214ENST00000472991 C8orf44Q96CB5 159 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 EBPLQ9BY08 206 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 ILKAPQ9H0C8 392 aaPredicted RBP8.54□□□□□ -1.04
SMC4-214ENST00000472991 PRORYQ9H606 182 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 PRTFDC1Q9NRG1 225 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 PNPOQ9NVS9 261 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 THAP1Q9NVV9 213 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 TEX10Q9NXF1 929 aaPredicted RBP8.54□□□□□ -1.04
SMC4-214ENST00000472991 KCMF1Q9P0J7 381 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 PHF11Q9UIL8 331 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 HAO1Q9UJM8 370 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 ADAM29Q9UKF5 820 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 MRPS33Q9Y291 106 aaKnown RBP8.54□□□□□ -1.04
SMC4-214ENST00000472991 MAN2B2Q9Y2E5 1009 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.54□□□□□ -1.04
SMC4-214ENST00000472991 ATG4BQ9Y4P1 393 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 MMACHCQ9Y4U1 282 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 ASB4Q9Y574 426 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 HS3ST3B1Q9Y662 390 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 KCNMB2Q9Y691 235 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 SPACA6W5XKT8 324 aa8.54□□□□□ -1.04
SMC4-214ENST00000472991 EXPH5Q8NEV8 1989 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 GNG14A0A1W2PPG7 69 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 ARGFXA6NJG6 315 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 MASP2O00187 686 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 SLC28A1O00337 649 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 KLF11O14901 512 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 PRMT3O60678 531 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 SEC22BO75396 215 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 AIFM1O95831 613 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 CYC1P08574 325 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 C8orf89P0DMQ9 161 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 NR2F6P10588 404 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 ACPPP15309 386 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 MAOAP21397 527 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 PRPH2P23942 346 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 TIA1P31483 386 aaKnown RBP eCLIP8.53□□□□□ -1.041e-7■■■□□ 16.3
SMC4-214ENST00000472991 BUD31P41223 144 aaPredicted RBP8.53□□□□□ -1.04
SMC4-214ENST00000472991 RPL14P50914 215 aaKnown RBP8.53□□□□□ -1.04
SMC4-214ENST00000472991 MAPK12P53778 367 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 RPL38P63173 70 aaKnown RBP8.53□□□□□ -1.04
SMC4-214ENST00000472991 OCRLQ01968 901 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 CHAF1BQ13112 559 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 GALNTL6Q49A17 601 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 CPZQ66K79 652 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 C18orf63Q68DL7 685 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 TMEM205Q6UW68 189 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 KIRREL2Q6UWL6 708 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 Q6ZSR9 355 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 CLNKQ7Z7G1 428 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 SCUBE1Q8IWY4 988 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 HOMEZQ8IX15 550 aa8.53□□□□□ -1.04
SMC4-214ENST00000472991 ZNF595Q8IYB9 648 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms