RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 SNX7Q9UNH6 387 aa10.09□□□□□ -0.79
APLF-204ENST00000471727 DUSP12Q9UNI6 340 aa10.09□□□□□ -0.79
APLF-204ENST00000471727 OR1A2Q9Y585 309 aa10.09□□□□□ -0.79
APLF-204ENST00000471727 CFAP20Q9Y6A4 193 aaKnown RBP10.09□□□□□ -0.79
APLF-204ENST00000471727 A3GALT2U3KPV4 340 aa10.09□□□□□ -0.79
APLF-204ENST00000471727 LRRK1Q38SD2 2015 aa10.09□□□□□ -0.79
APLF-204ENST00000471727 KIAA1549LQ6ZVL6 1849 aa10.09□□□□□ -0.79
APLF-204ENST00000471727 FEZF1A0PJY2 475 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 ZAR1LA6NP61 321 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 TMX2-CTNND1H3BSU7 103 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 RTCAO00442 366 aaKnown RBP10.08□□□□□ -0.8
APLF-204ENST00000471727 HMGN4O00479 90 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 PCDH17O14917 1159 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 PRICKLE3O43900 615 aaPredicted RBP10.08□□□□□ -0.8
APLF-204ENST00000471727 TMPRSS11DO60235 418 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 LCMT2O60294 686 aaKnown RBP10.08□□□□□ -0.8
APLF-204ENST00000471727 CNOT3O75175 753 aaKnown RBP10.08□□□□□ -0.8
APLF-204ENST00000471727 SLITRK5O94991 958 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 ZBTB11O95625 1053 aaPredicted RBP10.08□□□□□ -0.8
APLF-204ENST00000471727 VIPP01282 170 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 CEACAM5P06731 702 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 OSMP13725 252 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 CD36P16671 472 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 GABRB1P18505 474 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 TNFRSF1BP20333 461 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 GDI1P31150 447 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 GPC1P35052 558 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 KHKP50053 298 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 CASP9P55211 416 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 STXBP1P61764 594 aaKnown RBP10.08□□□□□ -0.8
APLF-204ENST00000471727 COX10Q12887 443 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 ILKQ13418 452 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 MLF2Q15773 248 aaPredicted RBP10.08□□□□□ -0.8
APLF-204ENST00000471727 SMN1Q16637 294 aaKnown RBP10.08□□□□□ -0.8
APLF-204ENST00000471727 NDUFA9Q16795 377 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 DUSP7Q16829 419 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 ATAT1Q5SQI0 421 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 DCST1Q5T197 706 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 MRM1Q6IN84 353 aaKnown RBP10.08□□□□□ -0.8
APLF-204ENST00000471727 FRMPD2BQ6IN97 320 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 TNFAIP8L2Q6P589 184 aaPredicted RBP10.08□□□□□ -0.8
APLF-204ENST00000471727 ADCK1Q86TW2 530 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 STX19Q8N4C7 294 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 FAM46DQ8NEK8 389 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 OR56A1Q8NGH5 318 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 OR52J3Q8NH60 311 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 UTP15Q8TED0 518 aaKnown RBP10.08□□□□□ -0.8
APLF-204ENST00000471727 GANCQ8TET4 914 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 EXOSC8Q96B26 276 aaKnown RBP10.08□□□□□ -0.8
APLF-204ENST00000471727 HSPBAP1Q96EW2 488 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 BBS4Q96RK4 519 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 MYOCQ99972 504 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 NIPSNAP1Q9BPW8 284 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 DPH7Q9BTV6 452 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 APOOQ9BUR5 198 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 BTBD2Q9BX70 525 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 UCK2Q9BZX2 261 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 ZDHHC4Q9NPG8 344 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 SLAMF7Q9NQ25 335 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 GIMAP4Q9NUV9 329 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 IMP3Q9NV31 184 aaKnown RBP10.08□□□□□ -0.8
APLF-204ENST00000471727 LYARQ9NX58 379 aaKnown RBP10.08□□□□□ -0.8
APLF-204ENST00000471727 FBXL12Q9NXK8 326 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 ZNF226Q9NYT6 803 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 SEC14L3Q9UDX4 400 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 ACAD8Q9UKU7 415 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 WDR37Q9Y2I8 494 aa10.08□□□□□ -0.8
APLF-204ENST00000471727 TCF20Q9UGU0 1960 aaKnown RBP10.08□□□□□ -0.8
APLF-204ENST00000471727 KIF26AQ9ULI4 1882 aaPredicted RBP10.08□□□□□ -0.8
APLF-204ENST00000471727 A0A0G2JPF8 293 aa10.07□□□□□ -0.8
APLF-204ENST00000471727 A0A1W2PQU0 124 aa10.07□□□□□ -0.8
APLF-204ENST00000471727 HNRNPCL2B2RXH8 293 aa10.07□□□□□ -0.8
APLF-204ENST00000471727 HNRNPCL3B7ZW38 293 aa10.07□□□□□ -0.8
APLF-204ENST00000471727 KPNA4O00629 521 aaPredicted RBP10.07□□□□□ -0.8
APLF-204ENST00000471727 SLC28A2O43868 658 aa10.07□□□□□ -0.8
APLF-204ENST00000471727 RNGTTO60942 597 aaKnown RBP10.07□□□□□ -0.8
APLF-204ENST00000471727 H1F0P07305 194 aaKnown RBP10.07□□□□□ -0.8
APLF-204ENST00000471727 HNRNPCL4P0DMR1 293 aa10.07□□□□□ -0.8
APLF-204ENST00000471727 PIPP12273 146 aaPredicted RBP10.07□□□□□ -0.8
APLF-204ENST00000471727 EN2P19622 333 aaPredicted RBP10.07□□□□□ -0.8
APLF-204ENST00000471727 PSMB5P28074 263 aa10.07□□□□□ -0.8
APLF-204ENST00000471727 NTSR1P30989 418 aa10.07□□□□□ -0.8
APLF-204ENST00000471727 WASP42768 502 aa10.07□□□□□ -0.8
APLF-204ENST00000471727 CTSKP43235 329 aa10.07□□□□□ -0.8
APLF-204ENST00000471727 KIR2DL1P43626 348 aaPredicted RBP10.07□□□□□ -0.8
APLF-204ENST00000471727 IDH2P48735 452 aaKnown RBP10.07□□□□□ -0.8
APLF-204ENST00000471727 CRISP3P54108 245 aa10.07□□□□□ -0.8
APLF-204ENST00000471727 UGT2B15P54855 530 aa10.07□□□□□ -0.8
APLF-204ENST00000471727 KIAA1024LP59773 190 aa10.07□□□□□ -0.8
APLF-204ENST00000471727 ALDH6A1Q02252 535 aaKnown RBP10.07□□□□□ -0.8
APLF-204ENST00000471727 HSPB3Q12988 150 aa10.07□□□□□ -0.8
APLF-204ENST00000471727 FGL2Q14314 439 aa10.07□□□□□ -0.8
APLF-204ENST00000471727 PUM1Q14671 1186 aaKnown RBP eCLIP10.07□□□□□ -0.8
APLF-204ENST00000471727 NR1D2Q14995 579 aa10.07□□□□□ -0.8
APLF-204ENST00000471727 PTGES3Q15185 160 aaKnown RBP10.07□□□□□ -0.8
APLF-204ENST00000471727 C2orf27AQ580R0 203 aa10.07□□□□□ -0.8
APLF-204ENST00000471727 NDUFAF5Q5TEU4 345 aa10.07□□□□□ -0.8
APLF-204ENST00000471727 ZNF770Q6IQ21 691 aaPredicted RBP10.07□□□□□ -0.8
APLF-204ENST00000471727 ANKRD54Q6NXT1 300 aa10.07□□□□□ -0.8
APLF-204ENST00000471727 WASH2PQ6VEQ5 465 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms