RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 SOCS3O14543 225 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 CLDN3O15551 220 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 TOM1L1O75674 476 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 SEC24AO95486 1093 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 TPM3P06753 285 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 TPM2P07951 284 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 DANCRP0C864 163 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 EPB41P11171 864 aaKnown RBP4.61□□□□□ -1.67
CCDC39-202ENST00000471307 DARSP14868 501 aaKnown RBP4.61□□□□□ -1.67
CCDC39-202ENST00000471307 ACADSP16219 412 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 EEF1DP29692 281 aaKnown RBP4.61□□□□□ -1.67
CCDC39-202ENST00000471307 OPRL1P41146 370 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 LIG4P49917 911 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 CSRP3P50461 194 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 UBASH3AP57075 661 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 MRPS6P82932 125 aaKnown RBP4.61□□□□□ -1.67
CCDC39-202ENST00000471307 MAT1AQ00266 395 aaKnown RBP4.61□□□□□ -1.67
CCDC39-202ENST00000471307 ENPEPQ07075 957 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 NFATC2Q13469 925 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 SQLEQ14534 574 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 KYAT1Q16773 422 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 FILIP1LQ4L180 1135 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 SYT14P1Q58G82 188 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 IGSF11Q5DX21 431 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 RNASEH2BQ5TBB1 312 aaKnown RBP4.61□□□□□ -1.67
CCDC39-202ENST00000471307 ARMCX5Q6P1M9 558 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 SUSD1Q6UWL2 747 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 GET4Q7L5D6 327 aaPredicted RBP4.61□□□□□ -1.67
CCDC39-202ENST00000471307 XXYLT1Q8NBI6 393 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 MSANTD4Q8NCY6 345 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 OR10S1Q8NGN2 331 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 VANGL1Q8TAA9 524 aaPredicted RBP4.61□□□□□ -1.67
CCDC39-202ENST00000471307 MAPK15Q8TD08 544 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 C10orf90Q96M02 699 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 OLFM1Q99784 485 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 TCHPQ9BT92 498 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 MINDY3Q9H8M7 445 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 TBC1D17Q9HA65 648 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 SLC35C2Q9NQQ7 365 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 FAM207AQ9NSI2 230 aaPredicted RBP4.61□□□□□ -1.67
CCDC39-202ENST00000471307 PCDHGB4Q9UN71 923 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 ANGPTL3Q9Y5C1 460 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 TRPV2Q9Y5S1 764 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 MROH7Q68CQ1 1323 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 ZNF233A6NK53 670 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 MPTX1A8MV57 137 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 OGTO15294 1046 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 STX10O60499 249 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 MAGEC1O60732 1142 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 SRSF10O75494 262 aaKnown RBP4.6□□□□□ -1.67
CCDC39-202ENST00000471307 AKAP3O75969 853 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 BEST1O76090 585 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 ERLIN2O94905 339 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 ADCY5O95622 1261 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 HSPA4LO95757 839 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 CHRNA1P02708 482 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 IQCF3P0C7M6 154 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 MCF2P10911 925 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 KRT13P13646 458 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 GLULP15104 373 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 ARF4P18085 180 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-202ENST00000471307 ADSSP30520 456 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 PTGER3P43115 390 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 MATR3P43243 847 aaKnown RBP eCLIP4.6□□□□□ -1.67
CCDC39-202ENST00000471307 MTIF2P46199 727 aaKnown RBP4.6□□□□□ -1.67
CCDC39-202ENST00000471307 IFI35P80217 286 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-202ENST00000471307 MS4A2Q01362 244 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 TAF10Q12962 218 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 ENPP2Q13822 863 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 HERC3Q15034 1050 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 KRT31Q15323 416 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 CCDC40Q4G0X9 1142 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 SLC25A53Q5H9E4 307 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 SLC35D3Q5M8T2 416 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 ATF7IP2Q5U623 682 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 C11orf63Q6NUN7 778 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 SLC39A4Q6P5W5 647 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 TMEM207Q6UWW9 146 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 BTN2A1Q7KYR7 527 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 CATSPER4Q7RTX7 472 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 ANKRD33Q7Z3H0 272 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 GALNTL5Q7Z4T8 443 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 CDC20BQ86Y33 519 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 GPD1LQ8N335 351 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 MINDY1Q8N5J2 469 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 OR6S1Q8NH40 331 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 OR1L3Q8NH93 324 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 GATAD1Q8WUU5 269 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 SPACA9Q96E40 222 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-202ENST00000471307 OMA1Q96E52 524 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 CCDC51Q96ER9 411 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 EEF2KMTQ96G04 330 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 CNOT6LQ96LI5 555 aaKnown RBP4.6□□□□□ -1.67
CCDC39-202ENST00000471307 SFXN2Q96NB2 322 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 NAP1L5Q96NT1 182 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-202ENST00000471307 CBWD1Q9BRT8 395 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 TUBGCP2Q9BSJ2 902 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 MRPL9Q9BYD2 267 aaKnown RBP4.6□□□□□ -1.67
CCDC39-202ENST00000471307 SHARPINQ9H0F6 387 aa4.6□□□□□ -1.67
CCDC39-202ENST00000471307 THAP2Q9H0W7 228 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms