RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 OR7G3Q8NG95 312 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 GPR137Q96N19 417 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 CENPKQ9BS16 269 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 MS4A8Q9BY19 250 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 PNO1Q9NRX1 252 aaKnown RBP12.59□□□□□ -0.39
HMGN1-211ENST00000471260 MS4A12Q9NXJ0 267 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 KCMF1Q9P0J7 381 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 VTI1BQ9UEU0 232 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 KLF13Q9Y2Y9 288 aaPredicted RBP12.59□□□□□ -0.39
HMGN1-211ENST00000471260 ASB1Q9Y576 335 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 TNPO3Q9Y5L0 923 aaKnown RBP12.59□□□□□ -0.39
HMGN1-211ENST00000471260 MYO7BQ6PIF6 2116 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 TRGV8A0A0C4DH27 118 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 TRBV11-1A0A0K0K1C0 115 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 IQANK1A0A1B0GTG1 560 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 HMX2A2RU54 273 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 KLK8O60259 260 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 SLC19A2O60779 497 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 ZG16O60844 167 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 ZFAND5O76080 213 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 HIST1H1TP22492 207 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-211ENST00000471260 ATP5A1P25705 553 aaKnown RBP12.58□□□□□ -0.4
HMGN1-211ENST00000471260 CERS1P27544 350 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 TYK2P29597 1187 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 DCTP40126 519 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 PIK3CBP42338 1070 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 PIK3CGP48736 1102 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 SERPINB8P50452 374 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 ALDH18A1P54886 795 aaKnown RBP12.58□□□□□ -0.4
HMGN1-211ENST00000471260 WDR4P57081 412 aaKnown RBP12.58□□□□□ -0.4
HMGN1-211ENST00000471260 PMP22Q01453 160 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 STX4Q12846 297 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 MPP2Q14168 576 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 PCBP2Q15366 365 aaKnown RBP eCLIP12.58□□□□□ -0.4
HMGN1-211ENST00000471260 AP5B1Q2VPB7 878 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 ZNF468Q5VIY5 522 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-211ENST00000471260 HHATQ5VTY9 493 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 ADNP2Q6IQ32 1131 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 BNC2Q6ZN30 1099 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-211ENST00000471260 Q6ZPB1 254 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-211ENST00000471260 ASRGL1Q7L266 308 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 UBE3DQ7Z6J8 389 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 GPALPP1Q8IXQ4 340 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 ACOT4Q8N9L9 421 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 MORN4Q8NDC4 146 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 TMEM52Q8NDY8 209 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 KCTD4Q8WVF5 259 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 KLHL29Q96CT2 875 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 REPS1Q96D71 796 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 TMEM237Q96Q45 408 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 HES7Q9BYE0 225 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 VPS11Q9H270 941 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 LRMDAQ9H2I8 198 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 SNX15Q9NRS6 342 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 TBK1Q9UHD2 729 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 ZNF180Q9UJW8 692 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 FBXW2Q9UKT8 454 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 ZNF835Q9Y2P0 537 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 YARS2Q9Y2Z4 477 aaKnown RBP12.58□□□□□ -0.4
HMGN1-211ENST00000471260 ANGPTL3Q9Y5C1 460 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 PCDHGA11Q9Y5H2 935 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 CLCA3PQ9Y6N3 262 aa12.58□□□□□ -0.4
HMGN1-211ENST00000471260 A0A096LPK6 155 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 KLRC4-KLRK1H3BQV0 150 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 TGFBR3LH3BV60 316 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 ASNA1O43681 348 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 ITGA10O75578 1167 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 TGFB1P01137 390 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 IFNA16P05015 189 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 TROVE2P10155 538 aaKnown RBP eCLIP12.57□□□□□ -0.4
HMGN1-211ENST00000471260 PCNAP12004 261 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 GFAPP14136 432 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 CREB1P16220 341 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 HNRNPFP52597 415 aaKnown RBP12.57□□□□□ -0.4
HMGN1-211ENST00000471260 PHEXP78562 749 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 ART3Q13508 389 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 PFKFB4Q16877 469 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 DEPDC1Q5TB30 811 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 KHDRBS2Q5VWX1 349 aaKnown RBP12.57□□□□□ -0.4
HMGN1-211ENST00000471260 CGB2Q6NT52 195 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 RPTNQ6XPR3 784 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-211ENST00000471260 ZNF227Q86WZ6 799 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 SPPL2CQ8IUH8 684 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 SIAH3Q8IW03 269 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 TRIM42Q8IWZ5 723 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 GHDCQ8N2G8 530 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 TMEM156Q8N614 296 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 TEX9Q8N6V9 391 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 OR8K3Q8NH51 312 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 OR14A16Q8NHC5 309 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 MZB1Q8WU39 189 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 NCLNQ969V3 563 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 RGMAQ96B86 450 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 CSF3RQ99062 836 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 PAFAH2Q99487 392 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 ALOXE3Q9BYJ1 711 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 RYDENQ9NUL5 291 aaKnown RBP12.57□□□□□ -0.4
HMGN1-211ENST00000471260 ENTPD4Q9Y227 616 aa12.57□□□□□ -0.4
HMGN1-211ENST00000471260 KLF2Q9Y5W3 355 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms