RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 SPNS3Q6ZMD2 512 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 SLCO4C1Q6ZQN7 724 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 ADCK2Q7Z695 626 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 ANKRD37Q7Z713 158 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 CPLX4Q7Z7G2 160 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 TMPRSS11BQ86T26 416 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 PLD3Q8IV08 490 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 CLYBLQ8N0X4 340 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 LGI4Q8N135 537 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 L3MBTL4Q8NA19 623 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 TMEM178AQ8NBL3 297 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 CCDC168Q8NDH2 2452 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 ABHD11Q8NFV4 315 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 OR4F6Q8NGB9 312 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 OR51Q1Q8NH59 317 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 M1APQ8TC57 530 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 PTCD3Q96EY7 689 aaKnown RBP8.5□□□□□ -1.05
SF3A1-206ENST00000471037 NPAS2Q99743 824 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 TREX2Q9BQ50 279 aaPredicted RBP8.5□□□□□ -1.05
SF3A1-206ENST00000471037 UTP23Q9BRU9 249 aaKnown RBP8.5□□□□□ -1.05
SF3A1-206ENST00000471037 EFCAB11Q9BUY7 163 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 SHCBP1LQ9BZQ2 653 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 PITHD1Q9GZP4 211 aaPredicted RBP8.5□□□□□ -1.05
SF3A1-206ENST00000471037 ENKD1Q9H0I2 346 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 PELI2Q9HAT8 420 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 KCNK13Q9HB14 408 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 MMP25Q9NPA2 562 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 PFDN4Q9NQP4 134 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 ABCF3Q9NUQ8 709 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 VTI1BQ9UEU0 232 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 ZDHHC2Q9UIJ5 367 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 TRAF6Q9Y4K3 522 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 HIVEP1P15822 2718 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 DCHS2Q6V1P9 2916 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 E9PLN8 166 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 FAM227AF5H4B4 570 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 H7BY64 318 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 HDAC3O15379 428 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 NEURL1O76050 574 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 OR4F21O95013 312 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 FAM107AO95990 144 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 CHEK2O96017 543 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 C1GALT1C1LP0DN25 315 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 UROSP10746 265 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 CDH1P12830 882 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 CD46P15529 392 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 ALOX15P16050 662 aaPredicted RBP8.49□□□□□ -1.05
SF3A1-206ENST00000471037 IL1RNP18510 177 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 HMOX2P30519 316 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 CCR8P51685 355 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 RPS15AP62244 130 aaKnown RBP8.49□□□□□ -1.05
SF3A1-206ENST00000471037 DOC2AQ14183 400 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 HIST2H2ACQ16777 129 aaPredicted RBP8.49□□□□□ -1.05
SF3A1-206ENST00000471037 MFSD4BQ5TF39 518 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 KANK2Q63ZY3 851 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 FCRLBQ6BAA4 426 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 HIST2H2AA3Q6FI13 130 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 SPINK14Q6IE38 97 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 RNF165Q6ZSG1 346 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 PRSS41Q7RTY9 318 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 MYLK4Q86YV6 388 aaPredicted RBP8.49□□□□□ -1.05
SF3A1-206ENST00000471037 CHERPQ8IWX8 916 aaKnown RBP8.49□□□□□ -1.05
SF3A1-206ENST00000471037 SHISA5Q8N114 240 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 GHDCQ8N2G8 530 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 SLC5A8Q8N695 610 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 HORMAD2Q8N7B1 307 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 CDYL2Q8N8U2 506 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 FAM98AQ8NCA5 519 aaKnown RBP8.49□□□□□ -1.05
SF3A1-206ENST00000471037 PLPP5Q8NEB5 264 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 METTL6Q8TCB7 284 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 AGR3Q8TD06 166 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 STON2Q8WXE9 905 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 UBE2E3Q969T4 207 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 REPS1Q96D71 796 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 TM4SF19Q96DZ7 209 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 THAP11Q96EK4 314 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 PRAP1Q96NZ9 151 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 CDK15Q96Q40 435 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 DMRTA2Q96SC8 542 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 CCT8L2Q96SF2 557 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 CCT7Q99832 543 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 VKORC1Q9BQB6 163 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 AIF1LQ9BQI0 150 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 HES7Q9BYE0 225 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 TSPAN10Q9H1Z9 355 aaPredicted RBP8.49□□□□□ -1.05
SF3A1-206ENST00000471037 KLHL1Q9NR64 748 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 TMEM184CQ9NVA4 438 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 HCN3Q9P1Z3 774 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 KLHL14Q9P2G3 628 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 MARCOQ9UEW3 520 aaPredicted RBP8.49□□□□□ -1.05
SF3A1-206ENST00000471037 ZNF225Q9UK10 706 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 ITGB1BP2Q9UKP3 347 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 SNX6Q9UNH7 406 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 RNF11Q9Y3C5 154 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 USH1CQ9Y6N9 552 aa8.49□□□□□ -1.05
SF3A1-206ENST00000471037 A0A1B0GTL3 188 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 TRPC5OSA6NMA1 111 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 GABRR3A8MPY1 467 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 NPIPA5E9PKD4 350 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 H0YIV9 168 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms