RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 EXOSC8Q96B26 276 aaKnown RBP10.58□□□□□ -0.72
SREBF1-209ENST00000470247 PPCDCQ96CD2 204 aa10.58□□□□□ -0.72
SREBF1-209ENST00000470247 CNRIP1Q96F85 164 aaPredicted RBP10.58□□□□□ -0.72
SREBF1-209ENST00000470247 SCNM1Q9BWG6 230 aa10.58□□□□□ -0.72
SREBF1-209ENST00000470247 YIPF2Q9BWQ6 316 aa10.58□□□□□ -0.72
SREBF1-209ENST00000470247 TRIM4Q9C037 500 aa10.58□□□□□ -0.72
SREBF1-209ENST00000470247 SLC35C2Q9NQQ7 365 aa10.58□□□□□ -0.72
SREBF1-209ENST00000470247 PRTFDC1Q9NRG1 225 aa10.58□□□□□ -0.72
SREBF1-209ENST00000470247 ARL8BQ9NVJ2 186 aa10.58□□□□□ -0.72
SREBF1-209ENST00000470247 SH3BP4Q9P0V3 963 aa10.58□□□□□ -0.72
SREBF1-209ENST00000470247 IFT80Q9P2H3 777 aaPredicted RBP10.58□□□□□ -0.72
SREBF1-209ENST00000470247 ZNF282Q9UDV7 671 aaPredicted RBP10.58□□□□□ -0.72
SREBF1-209ENST00000470247 UTS2RQ9UKP6 389 aa10.58□□□□□ -0.72
SREBF1-209ENST00000470247 MAPRE3Q9UPY8 281 aa10.58□□□□□ -0.72
SREBF1-209ENST00000470247 CCDC88CQ9P219 2028 aa10.58□□□□□ -0.72
SREBF1-209ENST00000470247 NUP214P35658 2090 aaPredicted RBP10.57□□□□□ -0.72
SREBF1-209ENST00000470247 CROCCQ5TZA2 2017 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 LOC100653049A0A140TA62 436 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 MYOCOSA0A1B0GUC4 107 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 CCT8L1PA6NM43 557 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 MYO1GB0I1T2 1018 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 FBP2O00757 339 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 BRINP1O60477 761 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 RAD1O60671 282 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 CDC123O75794 336 aaPredicted RBP10.57□□□□□ -0.72
SREBF1-209ENST00000470247 KRT34O76011 436 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 GPR75O95800 540 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 PGRP06401 933 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 F8A1P23610 371 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 S100A3P33764 101 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 HPCAL1P37235 193 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 HSD17B7P56937 341 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 FOLH1Q04609 750 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 ACTN3Q08043 901 aaPredicted RBP10.57□□□□□ -0.72
SREBF1-209ENST00000470247 KRT72Q14CN4 511 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 NCF4Q15080 339 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 VPS26BQ4G0F5 336 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 FAM69BQ5VUD6 431 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 MLIPQ5VWP3 458 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 CPZQ66K79 652 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 OR52E8Q6IFG1 317 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 QSOX2Q6ZRP7 698 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 RETREG3Q86VR2 466 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 SNX32Q86XE0 403 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 POU5F2Q8N7G0 328 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 CT55Q8WUE5 264 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 STARD8Q92502 1023 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 SPDL1Q96EA4 605 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 DUSP26Q9BV47 211 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 BHLHE41Q9C0J9 482 aaPredicted RBP10.57□□□□□ -0.72
SREBF1-209ENST00000470247 VN1R1Q9GZP7 353 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 WDR41Q9HAD4 459 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 SERHLQ9NQF3 203 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 MIEF1Q9NQG6 463 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 NECTIN3Q9NQS3 549 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 MRGBPQ9NV56 204 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 MMACHCQ9Y4U1 282 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 SPACA6W5XKT8 324 aa10.57□□□□□ -0.72
SREBF1-209ENST00000470247 PRSS51A0A1B0GVH4 220 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 A0A1W2PP18 115 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 BLACEA4D250 179 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 NR5A2O00482 541 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 CLDN4O14493 209 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 UBOX5O94941 541 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 IL6P05231 212 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 SNRPB2P08579 225 aaKnown RBP10.56□□□□□ -0.72
SREBF1-209ENST00000470247 RAB40ALP0C0E4 278 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 C8orf89P0DMQ9 161 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 COX4I1P13073 169 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 EFNA1P20827 205 aaPredicted RBP10.56□□□□□ -0.72
SREBF1-209ENST00000470247 MAOAP21397 527 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 CD82P27701 267 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 PTPN6P29350 595 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 PRDX6P30041 224 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 RPL3P39023 403 aaKnown RBP10.56□□□□□ -0.72
SREBF1-209ENST00000470247 FEN1P39748 380 aaKnown RBP10.56□□□□□ -0.72
SREBF1-209ENST00000470247 STAT5AP42229 794 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 KIR3DL1P43629 444 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 XKP51811 444 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 OCA2Q04671 838 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 DPY19L1Q2PZI1 675 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 PGS1Q32NB8 556 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 PAGE3Q5JUK9 113 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 DGAT2L6Q6ZPD8 337 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 SHISA6Q6ZSJ9 500 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 PRSS58Q8IYP2 241 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 CLECL1Q8IZS7 167 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 NLGN4XQ8N0W4 816 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 ESX1Q8N693 406 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 NLGN4YQ8NFZ3 816 aaPredicted RBP10.56□□□□□ -0.72
SREBF1-209ENST00000470247 OR4K14Q8NGD5 310 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 RP9Q8TA86 221 aaKnown RBP10.56□□□□□ -0.72
SREBF1-209ENST00000470247 TSLPQ969D9 159 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 NKD1Q969G9 470 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 MIEF2Q96C03 454 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 KLHL29Q96CT2 875 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 OR52E6Q96RD3 313 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 ZBTB18Q99592 522 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 PRPF18Q99633 342 aaKnown RBP10.56□□□□□ -0.72
SREBF1-209ENST00000470247 MESP1Q9BRJ9 268 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms