RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 PAQR8Q8TEZ7 354 aa17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 SPACA9Q96E40 222 aaPredicted RBP17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 PERPQ96FX8 193 aa17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 DOHHQ9BU89 302 aa17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 MXRA5Q9NR99 2828 aa17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 LRIT2A6NDA9 550 aa17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 LRRC3CA6NJW4 275 aa17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 CYR61O00622 381 aa17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 MSH2P43246 934 aa17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 CRYZQ08257 329 aaKnown RBP17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 SERTAD2Q14140 314 aa17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 TOMM20Q15388 145 aa17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 RBM20Q5T481 1227 aaKnown RBP17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 ANKRD22Q5VYY1 191 aa17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 LUZP2Q86TE4 346 aa17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 TTLQ8NG68 377 aa17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 SMPDL3BQ92485 455 aa17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 ISL2Q96A47 359 aa17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 SERINC2Q96SA4 455 aa17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 PIP5K1AQ99755 562 aa17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 WDR83Q9BRX9 315 aaKnown RBP17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 REXO4Q9GZR2 422 aaKnown RBP17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 CNIH4Q9P003 139 aa17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 DAPP1Q9UN19 280 aa17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 DOCK7Q96N67 2140 aa17.41■□□□□ 0.38
NCKIPSD-209ENST00000470006 NBEAL1Q6ZS30 2694 aa17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 RNF212BA8MTL3 300 aa17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 ETHE1O95571 254 aa17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 ACSL3O95573 720 aa17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 COX7A2P14406 83 aa17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 HPDP32754 393 aaPredicted RBP17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 MTTPP55157 894 aa17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 ADGRD1Q6QNK2 874 aa17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 PRSS57Q6UWY2 283 aa17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 TMIGD1Q6UXZ0 262 aa17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 OR10G3Q8NGC4 313 aa17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 ZNF721Q8TF20 911 aa17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 QRFPRQ96P65 431 aa17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 CCL19Q99731 98 aa17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 DESI2Q9BSY9 194 aa17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 UBTD1Q9HAC8 227 aa17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 XAB2Q9HCS7 855 aaKnown RBP17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 SH2D2AQ9NP31 389 aa17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 NDRG3Q9UGV2 375 aa17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 SLC6A5Q9Y345 797 aa17.4■□□□□ 0.38
NCKIPSD-209ENST00000470006 ANKDD1BA6NHY2 528 aa17.39■□□□□ 0.37
NCKIPSD-209ENST00000470006 DYRK3O43781 588 aa17.39■□□□□ 0.37
NCKIPSD-209ENST00000470006 ENO2P09104 434 aaPredicted RBP17.39■□□□□ 0.37
NCKIPSD-209ENST00000470006 TMIGD3P0DMS9 266 aaPredicted RBP17.39■□□□□ 0.37
NCKIPSD-209ENST00000470006 SERPINB3P29508 390 aa17.39■□□□□ 0.37
NCKIPSD-209ENST00000470006 RPL21P46778 160 aaKnown RBP17.39■□□□□ 0.37
NCKIPSD-209ENST00000470006 SLBPQ14493 270 aaKnown RBP eCLIP17.39■□□□□ 0.37
NCKIPSD-209ENST00000470006 KRT78Q8N1N4 520 aa17.39■□□□□ 0.37
NCKIPSD-209ENST00000470006 OR2L5Q8NG80 312 aa17.39■□□□□ 0.37
NCKIPSD-209ENST00000470006 NUBPLQ8TB37 319 aa17.39■□□□□ 0.37
NCKIPSD-209ENST00000470006 ZNF597Q96LX8 424 aa17.39■□□□□ 0.37
NCKIPSD-209ENST00000470006 GAL3ST4Q96RP7 486 aa17.39■□□□□ 0.37
NCKIPSD-209ENST00000470006 EGFL8Q99944 293 aa17.39■□□□□ 0.37
NCKIPSD-209ENST00000470006 GALNT8Q9NY28 637 aa17.39■□□□□ 0.37
NCKIPSD-209ENST00000470006 CD8B2A6NJW9 211 aa17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 IL18BPO95998 194 aa17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 C1QAP02745 245 aa17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 C1GALT1C1LP0DN25 315 aa17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 MLNP12872 115 aa17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 GNAZP19086 355 aa17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 PGGT1BP53609 377 aa17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 TGM3Q08188 693 aa17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 RCAN2Q14206 197 aa17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 SYDE1Q6ZW31 735 aaPredicted RBP17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 DND1Q8IYX4 353 aaKnown RBP17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 SLC15A4Q8N697 577 aa17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 C2CD4AQ8NCU7 369 aaPredicted RBP17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 MAIP1Q8WWC4 291 aa17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 DIO2Q92813 273 aa17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 SENP5Q96HI0 755 aaPredicted RBP17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 DGAT2Q96PD7 388 aa17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 PRDM14Q9GZV8 571 aa17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 PROK2Q9HC23 129 aa17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 JKAMPQ9P055 326 aa17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 C6orf203Q9P0P8 240 aaPredicted RBP17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 ZKSCAN5Q9Y2L8 839 aa17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 SPACA6W5XKT8 324 aa17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 CHD3Q12873 2000 aaKnown RBP17.38■□□□□ 0.37
NCKIPSD-209ENST00000470006 MBD3L4A6NDZ8 208 aaPredicted RBP17.37■□□□□ 0.37
NCKIPSD-209ENST00000470006 MBD3L3A6NE82 208 aaPredicted RBP17.37■□□□□ 0.37
NCKIPSD-209ENST00000470006 MBD3L5A6NJ08 208 aaPredicted RBP17.37■□□□□ 0.37
NCKIPSD-209ENST00000470006 WDR47O94967 919 aa17.37■□□□□ 0.37
NCKIPSD-209ENST00000470006 FGGP02679 453 aa17.37■□□□□ 0.37
NCKIPSD-209ENST00000470006 C8BP07358 591 aa17.37■□□□□ 0.37
NCKIPSD-209ENST00000470006 FPR1P21462 350 aa17.37■□□□□ 0.37
NCKIPSD-209ENST00000470006 MASP1P48740 699 aa17.37■□□□□ 0.37
NCKIPSD-209ENST00000470006 C9orf40Q8IXQ3 194 aa17.37■□□□□ 0.37
NCKIPSD-209ENST00000470006 MBD3L2Q8NHZ7 208 aaPredicted RBP17.37■□□□□ 0.37
NCKIPSD-209ENST00000470006 SERPINB12Q96P63 405 aa17.37■□□□□ 0.37
NCKIPSD-209ENST00000470006 BAG1Q99933 345 aaPredicted RBP17.37■□□□□ 0.37
NCKIPSD-209ENST00000470006 CALHM2Q9HA72 323 aa17.37■□□□□ 0.37
NCKIPSD-209ENST00000470006 CHCHD2Q9Y6H1 151 aaPredicted RBP17.37■□□□□ 0.37
NCKIPSD-209ENST00000470006 CRLF1O75462 422 aa17.36■□□□□ 0.37
NCKIPSD-209ENST00000470006 CLEC3AO75596 197 aa17.36■□□□□ 0.37
NCKIPSD-209ENST00000470006 KRT14P02533 472 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms