RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 GPR42O15529 346 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 CCNDBP1O95273 360 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 KRT6AP02538 564 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 KRT6BP04259 564 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 JAK1P23458 1154 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 ARL1P40616 181 aaPredicted RBP16.64■□□□□ 0.25
MRPL28-208ENST00000469744 KRT6CP48668 564 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 SLC7A2P52569 658 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 TBPL1P62380 186 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 ABRAXAS2Q15018 415 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 TLR1Q15399 786 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 NR6A1Q15406 480 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 AP5B1Q2VPB7 878 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 PRTGQ2VWP7 1150 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 DCAF10Q5QP82 559 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 SCIMPQ6UWF3 145 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 PDSS2Q86YH6 399 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 KBTBD2Q8IY47 623 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 DPP10Q8N608 796 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 CSNK1A1LQ8N752 337 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 TRIM15Q9C019 465 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 ATG10Q9H0Y0 220 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 ENAMQ9NRM1 1142 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 GPR83Q9NYM4 423 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 LUZP4Q9P127 313 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 ANKMY1Q9P2S6 941 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 EIF3LQ9Y262 564 aaKnown RBP16.64■□□□□ 0.25
MRPL28-208ENST00000469744 RUVBL1Q9Y265 456 aaKnown RBP16.64■□□□□ 0.25
MRPL28-208ENST00000469744 H7BY64 318 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 ULK1O75385 1050 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 ONECUT2O95948 504 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 CD63P08962 238 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 PIM1P11309 404 aaPredicted RBP16.63■□□□□ 0.25
MRPL28-208ENST00000469744 PRPH2P23942 346 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 ERFP50548 548 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 NME5P56597 212 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 UFM1P61960 85 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 MRPS22P82650 360 aaKnown RBP16.63■□□□□ 0.25
MRPL28-208ENST00000469744 FOXK1P85037 733 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 IZUMO2Q6UXV1 221 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 SNX31Q8N9S9 440 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 L3MBTL4Q8NA19 623 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 GLB1L3Q8NCI6 653 aaPredicted RBP16.63■□□□□ 0.25
MRPL28-208ENST00000469744 ADCY4Q8NFM4 1077 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 COL26A1Q96A83 441 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 PRAP1Q96NZ9 151 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 IP6K3Q96PC2 410 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 OR2A5Q96R48 311 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 NR1H4Q96RI1 486 aaPredicted RBP16.63■□□□□ 0.25
MRPL28-208ENST00000469744 MESP1Q9BRJ9 268 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 MFRPQ9BY79 579 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 ZNF304Q9HCX3 659 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 CCDC177Q9NQR7 707 aaPredicted RBP16.63■□□□□ 0.25
MRPL28-208ENST00000469744 DOCK10Q96BY6 2186 aa16.63■□□□□ 0.25
MRPL28-208ENST00000469744 AQP12BA6NM10 295 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 ANKRD28O15084 1053 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 P2RX6O15547 441 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 UGDHO60701 494 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 ALBP02768 609 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 GDF5P43026 501 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 CLNS1AP54105 237 aaKnown RBP16.62■□□□□ 0.25
MRPL28-208ENST00000469744 EEFSECP57772 596 aaKnown RBP16.62■□□□□ 0.25
MRPL28-208ENST00000469744 SNRPNP63162 240 aaKnown RBP16.62■□□□□ 0.25
MRPL28-208ENST00000469744 MRPS35P82673 323 aaKnown RBP16.62■□□□□ 0.25
MRPL28-208ENST00000469744 KLC1Q07866 573 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 PCDH1Q08174 1060 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 BLMHQ13867 455 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 PRAMEF13Q5VWM6 474 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 CYP20A1Q6UW02 462 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 SPATA24Q86W54 205 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 AQP12AQ8IXF9 295 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 SLC15A3Q8IY34 581 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 FAM9CQ8IZT9 166 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 RNF148Q8N7C7 305 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 CLEC1AQ8NC01 280 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 ATL1Q8WXF7 558 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 RERGQ96A58 199 aaPredicted RBP16.62■□□□□ 0.25
MRPL28-208ENST00000469744 LRGUKQ96M69 825 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 FER1L6-AS2Q96M78 137 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 BTBD9Q96Q07 612 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 SLC26A1Q9H2B4 701 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 WDR54Q9H977 334 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 DNAJC11Q9NVH1 559 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 RIMS3Q9UJD0 308 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 FBXL4Q9UKA2 621 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 ZNF451Q9Y4E5 1061 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 PCDHA9Q9Y5H5 950 aa16.62■□□□□ 0.25
MRPL28-208ENST00000469744 KCNE1BA0A087WTH5 132 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 ASPDHA6ND91 283 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 NME4O00746 187 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 DNAJA2O60884 412 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 ACPPP15309 386 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 EPORP19235 508 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 SLC6A2P23975 617 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 MMP11P24347 488 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 SLC7A1P30825 629 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 ABATP80404 500 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 NAE1Q13564 534 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 NFYCQ13952 458 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 TRIP10Q15642 601 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms