RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 ARMC10Q8N2F6 343 aa9.08□□□□□ -0.96
SRRT-208ENST00000469602 TMEM132CQ8N3T6 1108 aa9.08□□□□□ -0.96
SRRT-208ENST00000469602 CISD2Q8N5K1 135 aaKnown RBP9.08□□□□□ -0.96
SRRT-208ENST00000469602 GBP7Q8N8V2 638 aaPredicted RBP9.08□□□□□ -0.96
SRRT-208ENST00000469602 MORN4Q8NDC4 146 aa9.08□□□□□ -0.96
SRRT-208ENST00000469602 OR1N1Q8NGS0 311 aa9.08□□□□□ -0.96
SRRT-208ENST00000469602 OR14A16Q8NHC5 309 aa9.08□□□□□ -0.96
SRRT-208ENST00000469602 PTPMT1Q8WUK0 201 aaPredicted RBP9.08□□□□□ -0.96
SRRT-208ENST00000469602 DAZLQ92904 295 aaKnown RBP9.08□□□□□ -0.96
SRRT-208ENST00000469602 NCLNQ969V3 563 aa9.08□□□□□ -0.96
SRRT-208ENST00000469602 SNRNP40Q96DI7 357 aaKnown RBP9.08□□□□□ -0.96
SRRT-208ENST00000469602 C19orf60Q96EN9 201 aa9.08□□□□□ -0.96
SRRT-208ENST00000469602 VMP1Q96GC9 406 aa9.08□□□□□ -0.96
SRRT-208ENST00000469602 FAM111AQ96PZ2 611 aa9.08□□□□□ -0.96
SRRT-208ENST00000469602 KCNA7Q96RP8 456 aa9.08□□□□□ -0.96
SRRT-208ENST00000469602 SMC6Q96SB8 1091 aa9.08□□□□□ -0.96
SRRT-208ENST00000469602 DEFB126Q9BYW3 111 aa9.08□□□□□ -0.96
SRRT-208ENST00000469602 ACPTQ9BZG2 426 aa9.08□□□□□ -0.96
SRRT-208ENST00000469602 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.08□□□□□ -0.96
SRRT-208ENST00000469602 WDR41Q9HAD4 459 aa9.08□□□□□ -0.96
SRRT-208ENST00000469602 SENP1Q9P0U3 644 aa9.08□□□□□ -0.96
SRRT-208ENST00000469602 ABI3Q9P2A4 366 aa9.08□□□□□ -0.96
SRRT-208ENST00000469602 SLC17A7Q9P2U7 560 aa9.08□□□□□ -0.96
SRRT-208ENST00000469602 VPS29Q9UBQ0 182 aa9.08□□□□□ -0.96
SRRT-208ENST00000469602 HECTD1Q9ULT8 2610 aa9.08□□□□□ -0.96
SRRT-208ENST00000469602 USP9YO00507 2555 aaPredicted RBP9.08□□□□□ -0.96
SRRT-208ENST00000469602 POLEQ07864 2286 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 ZGRF1Q86YA3 2104 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 TRBV11-1A0A0K0K1C0 115 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 MYOCOSA0A1B0GUC4 107 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 GLOD5A6NK44 160 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 C17orf105B2RV13 164 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 RGS16O15492 202 aaPredicted RBP9.07□□□□□ -0.96
SRRT-208ENST00000469602 TRIM13O60858 407 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 SPAG7O75391 227 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 GPR75O95800 540 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 DDAH2O95865 285 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 COX7A2P14406 83 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 CHN1P15882 459 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 TNNI3P19429 210 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 HTR6P50406 440 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 MAPK12P53778 367 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 FOXA1P55317 472 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 MLF1P58340 268 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 KCNC4Q03721 635 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 ASPHQ12797 758 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 TUBA3CQ13748 450 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 NDUFAF5Q5TEU4 345 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 OR52E8Q6IFG1 317 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 RPUSD3Q6P087 351 aaKnown RBP9.07□□□□□ -0.96
SRRT-208ENST00000469602 TUBA3EQ6PEY2 450 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 ATCAYQ86WG3 371 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 C1orf52Q8N6N3 182 aaKnown RBP9.07□□□□□ -0.96
SRRT-208ENST00000469602 SUN3Q8TAQ9 357 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 TCP10LQ8TDR4 215 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 CHTF18Q8WVB6 975 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 DGAT2Q96PD7 388 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 BARD1Q99728 777 aaKnown RBP9.07□□□□□ -0.96
SRRT-208ENST00000469602 UTP23Q9BRU9 249 aaKnown RBP9.07□□□□□ -0.96
SRRT-208ENST00000469602 CDCP1Q9H5V8 836 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 TEX10Q9NXF1 929 aaPredicted RBP9.07□□□□□ -0.96
SRRT-208ENST00000469602 MAP10Q9P2G4 905 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 ZNF223Q9UK11 482 aaPredicted RBP9.07□□□□□ -0.96
SRRT-208ENST00000469602 TIMM22Q9Y584 194 aa9.07□□□□□ -0.96
SRRT-208ENST00000469602 COPG1Q9Y678 874 aaKnown RBP9.07□□□□□ -0.96
SRRT-208ENST00000469602 SERTM1A2A2V5 107 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 WASHC1A8K0Z3 465 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 GABRR3A8MPY1 467 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 CDK2AP1O14519 115 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 FCHO1O14526 889 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 PGRMC2O15173 223 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 DYRK3O43781 588 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 TYROBPO43914 113 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 PRAMEF2O60811 474 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 GUCY1B2O75343 617 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 VPS4BO75351 444 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 CRCPO75575 148 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 ALOX15P16050 662 aaPredicted RBP9.06□□□□□ -0.96
SRRT-208ENST00000469602 CREB1P16220 341 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 ALDH3A1P30838 453 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 CD96P40200 585 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 PLIN5Q00G26 463 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 HMGCS1Q01581 520 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 INAQ16352 499 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 SPIN4Q56A73 249 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 CEP85LQ5SZL2 805 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 HSDL2Q6YN16 418 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 ST13P4Q8IZP2 240 aaPredicted RBP9.06□□□□□ -0.96
SRRT-208ENST00000469602 GALNT11Q8NCW6 608 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 MDS2Q8NDY4 140 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 SLC2A12Q8TD20 617 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 UCN3Q969E3 161 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 RBM18Q96H35 190 aaKnown RBP9.06□□□□□ -0.96
SRRT-208ENST00000469602 ZIM3Q96PE6 472 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 PELOQ9BRX2 385 aaKnown RBP9.06□□□□□ -0.96
SRRT-208ENST00000469602 TRMOQ9BU70 441 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 MECRQ9BV79 373 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 GATA5Q9BWX5 397 aaPredicted RBP9.06□□□□□ -0.96
SRRT-208ENST00000469602 SHCBP1LQ9BZQ2 653 aa9.06□□□□□ -0.96
SRRT-208ENST00000469602 OR8D2Q9GZM6 311 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms