RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 CHAC2Q8WUX2 184 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 TMEM125Q96AQ2 219 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 EXOSC8Q96B26 276 aaKnown RBP11.79□□□□□ -0.52
USP11-206ENST00000469080 ZNF578Q96N58 590 aaPredicted RBP11.79□□□□□ -0.52
USP11-206ENST00000469080 TOX2Q96NM4 488 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 PPIL3Q9H2H8 161 aaKnown RBP11.79□□□□□ -0.52
USP11-206ENST00000469080 MTIF3Q9H2K0 278 aaKnown RBP11.79□□□□□ -0.52
USP11-206ENST00000469080 TMEM245Q9H330 911 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 EQTNQ9NQ60 294 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 RDH8Q9NYR8 311 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 TAC3Q9UHF0 121 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 PCDHB14Q9Y5E9 798 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 PCDHGB6Q9Y5F9 930 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 ELOVL7A1L3X0 281 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 ANKDD1BA6NHY2 528 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 OR52A4PA6NMU1 304 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 WASHC1A8K0Z3 465 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 LOC110117498-PIK3R3F6TDL0 507 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 H7BY64 318 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 FXYD1O00168 92 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 STX16O14662 325 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 MID1O15344 667 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 ADH1CP00326 375 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 CSF2P04141 144 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 CHRM5P08912 532 aaPredicted RBP11.79□□□□□ -0.52
USP11-206ENST00000469080 NUDT7P0C024 238 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 ADORA3P0DMS8 318 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 SELLP14151 372 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 RPS3P23396 243 aaKnown RBP eCLIP11.79□□□□□ -0.526e-7■■■□□ 18.8
USP11-206ENST00000469080 CRHBPP24387 322 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 VIPR1P32241 457 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 IDH2P48735 452 aaKnown RBP11.79□□□□□ -0.52
USP11-206ENST00000469080 ACVR1Q04771 509 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 HSPB3Q12988 150 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 TP53BP2Q13625 1128 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 COL4A6Q14031 1691 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 GPR33Q49SQ1 333 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 TMEM240Q5SV17 173 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 VITQ6UXI7 678 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 WASH2PQ6VEQ5 465 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 PLA2G15Q8NCC3 412 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 OR5AR1Q8NGP9 310 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 GLYATL1Q969I3 302 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 SLC47A1Q96FL8 570 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 PRAP1Q96NZ9 151 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 MS4A7Q9GZW8 240 aaPredicted RBP11.79□□□□□ -0.52
USP11-206ENST00000469080 SLAMF7Q9NQ25 335 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 PCDHB3Q9Y5E6 796 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 TCRBV3S1A0A5B6 114 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 CXCR6O00574 342 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 SLC22A5O76082 557 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 C6P13671 934 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 AGXTP21549 392 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 MAOBP27338 520 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 NKX3-2P78367 333 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 FAM78AQ5JUQ0 283 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 FAM129CQ86XR2 697 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 TIGD4Q8IY51 512 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 TMEM132CQ8N3T6 1108 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 OR10G6Q8NH81 332 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 TRNT1Q96Q11 434 aaKnown RBP11.79□□□□□ -0.52
USP11-206ENST00000469080 FAM129BQ96TA1 746 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 SPATA9Q9BWV2 254 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 SLIRPQ9GZT3 109 aaKnown RBP11.79□□□□□ -0.52
USP11-206ENST00000469080 P2RY12Q9H244 342 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 SLC6A15Q9H2J7 730 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 SDHAF3Q9NRP4 125 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 TMEM181Q9P2C4 612 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 RAB23Q9ULC3 237 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 MAPRE3Q9UPY8 281 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 MITFO75030 526 aaPredicted RBP11.78□□□□□ -0.52
USP11-206ENST00000469080 VPS4BO75351 444 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 GABARAPO95166 117 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 C8orf89P0DMQ9 161 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 LAMP1P11279 417 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 HOXB3P14651 431 aaPredicted RBP11.78□□□□□ -0.52
USP11-206ENST00000469080 ZNF8P17098 575 aaPredicted RBP11.78□□□□□ -0.52
USP11-206ENST00000469080 ENGP17813 658 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 SGCGQ13326 291 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 ZNF234Q14588 700 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 GANABQ14697 944 aaKnown RBP11.78□□□□□ -0.52
USP11-206ENST00000469080 AANATQ16613 207 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 CES5AQ6NT32 575 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 PNCKQ6P2M8 343 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 TBPL2Q6SJ96 375 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 KRT73Q86Y46 540 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 PHYKPLQ8IUZ5 450 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 CAMKK1Q8N5S9 505 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 OR52H1Q8NGJ2 320 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 CLP1Q92989 425 aaKnown RBP11.78□□□□□ -0.52
USP11-206ENST00000469080 MUL1Q969V5 352 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 BCL7BQ9BQE9 202 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 COPS4Q9BT78 406 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 LRRC3Q9BY71 257 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 NECTIN3Q9NQS3 549 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 BAIAP2Q9UQB8 552 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 PLEKHM1Q9Y4G2 1056 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 OARD1Q9Y530 152 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 ASXL3Q9C0F0 2248 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 TTLL8A6PVC2 850 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms