RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 DNAJB14Q8TBM8 379 aa11.19□□□□□ -0.62
VPS13D-204ENST00000469054 LRRC8CQ8TDW0 803 aa11.19□□□□□ -0.62
VPS13D-204ENST00000469054 C16orf78Q8WTQ4 265 aa11.19□□□□□ -0.62
VPS13D-204ENST00000469054 C19orf60Q96EN9 201 aa11.19□□□□□ -0.62
VPS13D-204ENST00000469054 FCRL1Q96LA6 429 aa11.19□□□□□ -0.62
VPS13D-204ENST00000469054 PPP3R2Q96LZ3 170 aa11.19□□□□□ -0.62
VPS13D-204ENST00000469054 UBL7Q96S82 380 aaPredicted RBP11.19□□□□□ -0.62
VPS13D-204ENST00000469054 ADNPQ9H2P0 1102 aa11.19□□□□□ -0.62
VPS13D-204ENST00000469054 PNO1Q9NRX1 252 aaKnown RBP11.19□□□□□ -0.62
VPS13D-204ENST00000469054 VTI1BQ9UEU0 232 aa11.19□□□□□ -0.62
VPS13D-204ENST00000469054 DLGAP4Q9Y2H0 992 aa11.19□□□□□ -0.62
VPS13D-204ENST00000469054 WBP11Q9Y2W2 641 aaKnown RBP11.19□□□□□ -0.62
VPS13D-204ENST00000469054 TMED5Q9Y3A6 229 aa11.19□□□□□ -0.62
VPS13D-204ENST00000469054 CFAP47Q6ZTR5 3102 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 MYOCOSA0A1B0GUC4 107 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 SAGE2PA6NJ88 616 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 A8MUA0 341 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 MKRN2OSH3BPM6 223 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 DYNC1I1O14576 645 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 PEX11AO75192 247 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 JUNP05412 331 aaKnown RBP11.18□□□□□ -0.62
VPS13D-204ENST00000469054 SERPINA7P05543 415 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 IL3P08700 152 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 FAM87AP0C7U9 286 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 DRD2P14416 443 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 SLC26A5P58743 744 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 AP2B1P63010 937 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 RPL38P63173 70 aaKnown RBP11.18□□□□□ -0.62
VPS13D-204ENST00000469054 ZNF763Q0D2J5 394 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 HEPACAMQ14CZ8 416 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 ELAVL1Q15717 326 aaKnown RBP11.18□□□□□ -0.62
VPS13D-204ENST00000469054 EXT1Q16394 746 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 BTBD16Q32M84 506 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 SLC48A1Q6P1K1 146 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 PCSK4Q6UW60 755 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 RIPOR1Q6ZS17 1223 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 KBTBD2Q8IY47 623 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 MMP21Q8N119 569 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 TMEM132CQ8N3T6 1108 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 AMER2Q8N7J2 671 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 EXD3Q8N9H8 876 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 OR4K14Q8NGD5 310 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.18□□□□□ -0.62
VPS13D-204ENST00000469054 M1APQ8TC57 530 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 CKAP2Q8WWK9 683 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 TUBGCP3Q96CW5 907 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 ABHD17AQ96GS6 310 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 RBM18Q96H35 190 aaKnown RBP11.18□□□□□ -0.62
VPS13D-204ENST00000469054 THOC3Q96J01 351 aaKnown RBP11.18□□□□□ -0.62
VPS13D-204ENST00000469054 SLC25A23Q9BV35 468 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 NUF2Q9BZD4 464 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 LHPPQ9H008 270 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 ADAP2Q9NPF8 381 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 HEY2Q9UBP5 337 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 TUBD1Q9UJT1 453 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 CES1P1Q9UKY3 287 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 PCDHGA9Q9Y5G4 932 aaKnown RBP11.18□□□□□ -0.62
VPS13D-204ENST00000469054 PCSK5Q92824 1860 aa11.18□□□□□ -0.62
VPS13D-204ENST00000469054 SLCO1B7G3V0H7 640 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 HDAC3O15379 428 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 KLHL41O60662 606 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 CELA2AP08217 269 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 PRR35P0CG20 571 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 SLC35E2P0CK97 266 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 KITP10721 976 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 SFTPCP11686 197 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 ALOX15P16050 662 aaPredicted RBP11.17□□□□□ -0.62
VPS13D-204ENST00000469054 TNNI3P19429 210 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 TACR1P25103 407 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 PIK3R1P27986 724 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 STT3AP46977 705 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 ALDH9A1P49189 494 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 XKP51811 444 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 HK2P52789 917 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 PLIN5Q00G26 463 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 KCNAB2Q13303 367 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 MYBPC3Q14896 1274 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 TERF2Q15554 542 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 C6orf136Q5SQH8 315 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 IRAK1BP1Q5VVH5 260 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 FAM71E1Q6IPT2 247 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 CRLF3Q8IUI8 442 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 WDR75Q8IWA0 830 aaKnown RBP11.17□□□□□ -0.62
VPS13D-204ENST00000469054 ST13P4Q8IZP2 240 aaPredicted RBP11.17□□□□□ -0.62
VPS13D-204ENST00000469054 ARFGAP2Q8N6H7 521 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 FNDC5Q8NAU1 212 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 NFAM1Q8NET5 270 aaPredicted RBP11.17□□□□□ -0.62
VPS13D-204ENST00000469054 B3GNT7Q8NFL0 401 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 PIWIL2Q8TC59 973 aaKnown RBP11.17□□□□□ -0.62
VPS13D-204ENST00000469054 PTPMT1Q8WUK0 201 aaPredicted RBP11.17□□□□□ -0.62
VPS13D-204ENST00000469054 DAZLQ92904 295 aaKnown RBP11.17□□□□□ -0.62
VPS13D-204ENST00000469054 PPP1R36Q96LQ0 422 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 MAGEB18Q96M61 343 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 C7orf26Q96N11 449 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 DGAT2Q96PD7 388 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 PELOQ9BRX2 385 aaKnown RBP11.17□□□□□ -0.62
VPS13D-204ENST00000469054 NUDT9Q9BW91 350 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 ZNF552Q9H707 407 aaPredicted RBP11.17□□□□□ -0.62
VPS13D-204ENST00000469054 AKTIPQ9H8T0 292 aa11.17□□□□□ -0.62
VPS13D-204ENST00000469054 MEAF6Q9HAF1 191 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms