RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 RPS13P62277 151 aaKnown RBP3.31□□□□□ -1.88
TRIM59-202ENST00000468542 PPP2R2AP63151 447 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 PSPHP78330 225 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 BTN3A2P78410 334 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 IGLV3-21P80748 117 aaPredicted RBP3.31□□□□□ -1.88
TRIM59-202ENST00000468542 OCRLQ01968 901 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 RHAGQ02094 409 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 TNFRSF17Q02223 184 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 ZNF763Q0D2J5 394 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 AIMP2Q13155 320 aaKnown RBP3.31□□□□□ -1.88
TRIM59-202ENST00000468542 MAD2L1Q13257 205 aaPredicted RBP3.31□□□□□ -1.88
TRIM59-202ENST00000468542 IL10RAQ13651 578 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 HEPACAMQ14CZ8 416 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 ABRAXAS2Q15018 415 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 KIAA0040Q15053 153 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 ELAVL1Q15717 326 aaKnown RBP3.31□□□□□ -1.88
TRIM59-202ENST00000468542 CEBPEQ15744 281 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 CHI3L2Q15782 390 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 EXT1Q16394 746 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 TTMPQ5BVD1 217 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 TOR1AIP1Q5JTV8 583 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 TBCELQ5QJ74 424 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 DCAF10Q5QP82 559 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 HHATQ5VTY9 493 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 C1orf189Q5VU69 101 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 CPZQ66K79 652 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 PLAG1Q6DJT9 500 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 OR52E8Q6IFG1 317 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 ADNP2Q6IQ32 1131 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 LCN10Q6JVE6 187 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 OGFOD2Q6N063 350 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 TCTN3Q6NUS6 607 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 JMJD6Q6NYC1 403 aaPredicted RBP3.31□□□□□ -1.88
TRIM59-202ENST00000468542 FAM199XQ6PEV8 388 aaPredicted RBP3.31□□□□□ -1.88
TRIM59-202ENST00000468542 BORAQ6PGQ7 559 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 SHISA2Q6UWI4 295 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 KIRREL2Q6UWL6 708 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 IGFL3Q6UXB1 125 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 ZNF793Q6ZN11 406 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 NDUFAF7Q7L592 441 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 PRSS41Q7RTY9 318 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 COMMD6Q7Z4G1 85 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 PPP1R32Q7Z5V6 425 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 GPR180Q86V85 440 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 CA13Q8N1Q1 262 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 NATD1Q8N6N6 113 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 CLEC1AQ8NC01 280 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 OR11G2Q8NGC1 345 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 OR8K3Q8NH51 312 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 PPP1R14CQ8TAE6 165 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.31□□□□□ -1.88
TRIM59-202ENST00000468542 ZCCHC10Q8TBK6 192 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 METTL21AQ8WXB1 218 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 CCT6BQ92526 530 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 ARL8AQ96BM9 186 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 MTERF3Q96E29 417 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 MAELQ96JY0 434 aaKnown RBP3.31□□□□□ -1.88
TRIM59-202ENST00000468542 FCRL1Q96LA6 429 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 PPP3R2Q96LZ3 170 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 F2RL3Q96RI0 385 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 SORT1Q99523 831 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 SIKE1Q9BRV8 207 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 TUBB6Q9BUF5 446 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 MECRQ9BV79 373 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 FAIM2Q9BWQ8 316 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 MRPL1Q9BYD6 325 aaKnown RBP3.31□□□□□ -1.88
TRIM59-202ENST00000468542 VN1R1Q9GZP7 353 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 AICDAQ9GZX7 198 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 ZNF700Q9H0M5 742 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 OR51B5Q9H339 312 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 C12orf65Q9H3J6 166 aaKnown RBP3.31□□□□□ -1.88
TRIM59-202ENST00000468542 KLHL31Q9H511 634 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 CCDC134Q9H6E4 229 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 MANSC1Q9H8J5 431 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 AKIRIN1Q9H9L7 192 aaPredicted RBP3.31□□□□□ -1.88
TRIM59-202ENST00000468542 WDR41Q9HAD4 459 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 MLXIPLQ9NP71 852 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 KCNK9Q9NPC2 374 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 MYNNQ9NPC7 610 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 MRGBPQ9NV56 204 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 TMEM45AQ9NWC5 275 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 C1orf109Q9NX04 203 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 P4HTMQ9NXG6 502 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 VTI1BQ9UEU0 232 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 IL17BQ9UHF5 180 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 PSME2Q9UL46 239 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 G3BP2Q9UN86 482 aaKnown RBP3.31□□□□□ -1.88
TRIM59-202ENST00000468542 ZNF232Q9UNY5 417 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 SLC12A4Q9UP95 1085 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 MAPRE3Q9UPY8 281 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 PTRH2Q9Y3E5 179 aaKnown RBP3.31□□□□□ -1.88
TRIM59-202ENST00000468542 TRAF6Q9Y4K3 522 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 ASB4Q9Y574 426 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 CLDN16Q9Y5I7 305 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 HS3ST3B1Q9Y662 390 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 KCNMB2Q9Y691 235 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 MAU2Q9Y6X3 613 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 FASNP49327 2511 aaKnown RBP3.31□□□□□ -1.88
TRIM59-202ENST00000468542 ZNF462Q96JM2 2506 aa3.31□□□□□ -1.88
TRIM59-202ENST00000468542 SCN3AQ9NY46 2000 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms