RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 P04436 131 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 SLC35E2BP0CK96 405 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 CCL3P10147 92 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 IGFBP2P18065 325 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 TFF3Q07654 80 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 ASPHQ12797 758 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 E2F2Q14209 437 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 KBTBD12Q3ZCT8 623 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 GRTP1Q5TC63 336 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 KHDRBS2Q5VWX1 349 aaKnown RBP19.48■□□□□ 0.71
COL9A3-207ENST00000467819 ACAD11Q709F0 780 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 ISCA2Q86U28 154 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 CCDC25Q86WR0 208 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 LAS2Q8IYD9 372 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 FAM109AQ8N4B1 249 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 OR7G3Q8NG95 312 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 CMTM7Q96FZ5 175 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 SGCZQ96LD1 299 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 IL1RL2Q9HB29 575 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 GRHL1Q9NZI5 618 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 ATP6AP2A0A1C7CYW4 349 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 ATP6AP2O75787 350 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 IGHG3P01860 377 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 CELA3AP09093 270 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 ACVR2AP27037 513 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 MSX1P28360 303 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 STT3AP46977 705 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 RAP1GDS1P52306 607 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 C2orf54Q08AI8 447 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 SLAMF1Q13291 335 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 OR4C11Q6IEV9 310 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 CYS1Q717R9 158 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 TRILQ7L0X0 811 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 MAATS1Q7Z4T9 603 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 TBC1D1Q86TI0 1168 aaPredicted RBP19.47■□□□□ 0.71
COL9A3-207ENST00000467819 MYLK4Q86YV6 388 aaPredicted RBP19.47■□□□□ 0.71
COL9A3-207ENST00000467819 OR10Q1Q8NGQ4 319 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 DOK4Q8TEW6 326 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 UBTD2Q8WUN7 234 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 PPWD1Q96BP3 646 aaKnown RBP19.47■□□□□ 0.71
COL9A3-207ENST00000467819 SENP5Q96HI0 755 aaPredicted RBP19.47■□□□□ 0.71
COL9A3-207ENST00000467819 ATOH8Q96SQ7 321 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 NMRAL1Q9HBL8 299 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 TUBA8Q9NY65 449 aaPredicted RBP19.47■□□□□ 0.71
COL9A3-207ENST00000467819 PYCARDQ9ULZ3 195 aa19.47■□□□□ 0.71
COL9A3-207ENST00000467819 OR14I1A6ND48 311 aa19.46■□□□□ 0.71
COL9A3-207ENST00000467819 FIGNL2A6NMB9 653 aa19.46■□□□□ 0.71
COL9A3-207ENST00000467819 FOXO6A8MYZ6 492 aa19.46■□□□□ 0.71
COL9A3-207ENST00000467819 BCKDKO14874 412 aa19.46■□□□□ 0.71
COL9A3-207ENST00000467819 KERAO60938 352 aa19.46■□□□□ 0.71
COL9A3-207ENST00000467819 PRKRAO75569 313 aaKnown RBP19.46■□□□□ 0.71
COL9A3-207ENST00000467819 GSTA2P09210 222 aa19.46■□□□□ 0.71
COL9A3-207ENST00000467819 SERPINB1P30740 379 aa19.46■□□□□ 0.71
COL9A3-207ENST00000467819 PIGAP37287 484 aa19.46■□□□□ 0.71
COL9A3-207ENST00000467819 FOLH1Q04609 750 aa19.46■□□□□ 0.71
COL9A3-207ENST00000467819 FOXO1Q12778 655 aa19.46■□□□□ 0.71
COL9A3-207ENST00000467819 PIGGQ5H8A4 983 aa19.46■□□□□ 0.71
COL9A3-207ENST00000467819 DEPDC1Q5TB30 811 aa19.46■□□□□ 0.71
COL9A3-207ENST00000467819 GRHL2Q6ISB3 625 aa19.46■□□□□ 0.71
COL9A3-207ENST00000467819 DGAT2L6Q6ZPD8 337 aa19.46■□□□□ 0.71
COL9A3-207ENST00000467819 C9orf40Q8IXQ3 194 aa19.46■□□□□ 0.71
COL9A3-207ENST00000467819 TEX9Q8N6V9 391 aa19.46■□□□□ 0.71
COL9A3-207ENST00000467819 LDAHQ9H6V9 325 aa19.46■□□□□ 0.71
COL9A3-207ENST00000467819 RPF2Q9H7B2 306 aaKnown RBP19.46■□□□□ 0.71
COL9A3-207ENST00000467819 SEMA4BQ9NPR2 832 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-207ENST00000467819 IGSF5Q9NSI5 407 aa19.46■□□□□ 0.71
COL9A3-207ENST00000467819 ATG4BQ9Y4P1 393 aa19.46■□□□□ 0.71
COL9A3-207ENST00000467819 SETD2Q9BYW2 2564 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-207ENST00000467819 HRKO00198 91 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 DYRK3O43781 588 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 LTA4HP09960 611 aaKnown RBP19.45■□□□□ 0.7
COL9A3-207ENST00000467819 EPB42P16452 691 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 MAN2A2P49641 1150 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 PLTPP55058 493 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 RIPPLY3P57055 190 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 IGLV3-21P80748 117 aaPredicted RBP19.45■□□□□ 0.7
COL9A3-207ENST00000467819 PLIN5Q00G26 463 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 TNFRSF17Q02223 184 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 TESK1Q15569 626 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 MPEG1Q2M385 716 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 C18orf63Q68DL7 685 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 B3GNT6Q6ZMB0 384 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 DMRTC2Q8IXT2 367 aaPredicted RBP19.45■□□□□ 0.7
COL9A3-207ENST00000467819 SPATA4Q8NEY3 305 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 HUS1BQ8NHY5 278 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 NUBPLQ8TB37 319 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 SLC22A8Q8TCC7 542 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 FBF1Q8TES7 1133 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 RGMAQ96B86 450 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 NXNL1Q96CM4 212 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 CNPPD1Q9BV87 410 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 EXO5Q9H790 373 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 ACAD8Q9UKU7 415 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 ANGPTL3Q9Y5C1 460 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 FAM215AQ9Y5M1 114 aa19.45■□□□□ 0.7
COL9A3-207ENST00000467819 PLPP1O14494 284 aa19.44■□□□□ 0.7
COL9A3-207ENST00000467819 AQP7O14520 342 aa19.44■□□□□ 0.7
COL9A3-207ENST00000467819 IGKV3-11P04433 115 aa19.44■□□□□ 0.7
COL9A3-207ENST00000467819 CRABP2P29373 138 aa19.44■□□□□ 0.7
COL9A3-207ENST00000467819 HNRNPH2P55795 449 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms