RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 NUDT8Q8WV74 236 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 SDCCAG3Q96C92 435 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 SERINC2Q96SA4 455 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 MAPKAP1Q9BPZ7 522 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 TEX10Q9NXF1 929 aaPredicted RBP6.48□□□□□ -1.37
SCAF4-204ENST00000467731 CCDC167Q9P0B6 97 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 MKL2Q9ULH7 1088 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 DAPP1Q9UN19 280 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 SRPK3Q9UPE1 567 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 TMA7Q9Y2S6 64 aaKnown RBP6.48□□□□□ -1.37
SCAF4-204ENST00000467731 ATG4BQ9Y4P1 393 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 PCDHB3Q9Y5E6 796 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 CEP295Q9C0D2 2601 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 ARPC4-TTLL3A0A0A6YYG9 625 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 DSCR3O14972 297 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 IL3P08700 152 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 ZNF28P17035 718 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 SDHBP21912 280 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 GPX3P22352 226 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 OR1D4P47884 311 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 AVPR1BP47901 424 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 LIM2P55344 173 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 B2MP61769 119 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 SKP1P63208 163 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 MC1RQ01726 317 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 RUNX2Q13950 521 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 SQLEQ14534 574 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 SPCS2Q15005 226 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 ADRM1Q16186 407 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 SYT16Q17RD7 645 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 DCAF12Q5T6F0 453 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 YOD1Q5VVQ6 348 aaPredicted RBP6.48□□□□□ -1.37
SCAF4-204ENST00000467731 SIGIRRQ6IA17 410 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 CEACAM20Q6UY09 585 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 SPARTQ8N0X7 666 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 MMP21Q8N119 569 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 MIER2Q8N344 545 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 EFCAB3Q8N7B9 438 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 WDR36Q8NI36 951 aaKnown RBP6.48□□□□□ -1.37
SCAF4-204ENST00000467731 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.48□□□□□ -1.37
SCAF4-204ENST00000467731 TM4SF18Q96CE8 201 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 MVB12AQ96EY5 273 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 ULBP3Q9BZM4 244 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 MYLK2Q9H1R3 596 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 NDUFA13Q9P0J0 144 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 HCN3Q9P1Z3 774 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 ASB4Q9Y574 426 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 DMXL2Q8TDJ6 3036 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 H0YIG0 161 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 AKAP10O43572 662 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 PRKRAO75569 313 aaKnown RBP6.48□□□□□ -1.37
SCAF4-204ENST00000467731 IL12AP29459 219 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 ASMTP46597 345 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 CLDN8P56748 225 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 NDUFAF5Q5TEU4 345 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 NIPAL1Q6NVV3 410 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 GPR180Q86V85 440 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 CPSF7Q8N684 471 aaKnown RBP6.48□□□□□ -1.37
SCAF4-204ENST00000467731 GALNT6Q8NCL4 622 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 TOR1AIP2Q8NFQ8 470 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 STARD8Q92502 1023 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 CSF3RQ99062 836 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 CCDC106Q9BWC9 280 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 DPY30Q9C005 99 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 MYNNQ9NPC7 610 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 KCMF1Q9P0J7 381 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 C5AR2Q9P296 337 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 NUP210LQ5VU65 1888 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 A0A1W2PR48 441 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 GLOD5A6NK44 160 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 NOTOA8MTQ0 251 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 FAM47E-STBD1D6RA91 191 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 PSMD12O00232 456 aaPredicted RBP6.47□□□□□ -1.37
SCAF4-204ENST00000467731 PROM1O43490 865 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 CPNE3O75131 537 aaKnown RBP6.47□□□□□ -1.37
SCAF4-204ENST00000467731 SLC22A3O75751 556 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 AIFM1O95831 613 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 ITGAXP20702 1163 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 JAK1P23458 1154 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 ALDH9A1P49189 494 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 MRPL19P49406 292 aaKnown RBP6.47□□□□□ -1.37
SCAF4-204ENST00000467731 ATP4BP51164 291 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 TRA2BP62995 288 aaKnown RBP6.47□□□□□ -1.37
SCAF4-204ENST00000467731 SHC2P98077 582 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 C2orf80Q0P641 193 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 ABHD18Q0P651 414 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 CYLC2Q14093 348 aaPredicted RBP6.47□□□□□ -1.37
SCAF4-204ENST00000467731 HEPACAMQ14CZ8 416 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 C18orf63Q68DL7 685 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 FAM71E1Q6IPT2 247 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 ANKRD26P1Q6NSI1 321 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 FAM180BQ6P0A1 224 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 TUBA3EQ6PEY2 450 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 TMPRSS7Q7RTY8 843 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 TRPM8Q7Z2W7 1104 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 TREML1Q86YW5 311 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 FUNDC1Q8IVP5 155 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 RIMKLAQ8IXN7 391 aa6.47□□□□□ -1.37
SCAF4-204ENST00000467731 CA13Q8N1Q1 262 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms