RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 TGFB1P01137 390 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 SELPP16109 830 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 IRS1P35568 1242 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 XKP51811 444 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 TAS2R50P59544 299 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 ARPC4P59998 168 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 DSTNP60981 165 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 RPS26P62854 115 aaKnown RBP12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 GPLD1P80108 840 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 EFR3AQ14156 821 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 TCTN1Q2MV58 587 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 RNLSQ5VYX0 342 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 TCTN3Q6NUS6 607 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 C22orf39Q6P5X5 142 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 PAMR1Q6UXH9 720 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 DPY19L3Q6ZPD9 716 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 HSD11B1LQ7Z5J1 315 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 CADM2Q8N3J6 435 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 CLDN22Q8N7P3 220 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 GDPD1Q8N9F7 314 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 ZNF461Q8TAF7 563 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 NELL2Q99435 816 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 WFDC6Q9BQY6 131 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 RERGLQ9H628 205 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 RPRD1BQ9NQG5 326 aaKnown RBP12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 BACE2Q9Y5Z0 518 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 TET1Q8NFU7 2136 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 A0A1W2PRB8 838 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 FAM25AB3EWG3 89 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 FAM25CB3EWG5 89 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 FAM25GB3EWG6 89 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 H3BN98 237 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 POLR1CO15160 346 aaPredicted RBP12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 ABLIM3O94929 683 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 EFEMP2O95967 443 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 TP53P04637 393 aaPredicted RBP12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 CTSCP53634 463 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 SP3Q02447 781 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 PDZK1Q5T2W1 519 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 ZDHHC20Q5W0Z9 365 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 RBM45Q8IUH3 476 aaKnown RBP12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 CAMKK1Q8N5S9 505 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 IQCF1Q8N6M8 205 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 OR8J1Q8NGP2 316 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 GRPEL2Q8TAA5 225 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 DHRS1Q96LJ7 313 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 TMEM175Q9BSA9 504 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 MYNNQ9NPC7 610 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 MYL12BO14950 172 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 PRKYO43930 277 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 OR10H3O60404 316 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 SRPRAP08240 638 aaKnown RBP12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 TSPAN19P0C672 248 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 SDC2P34741 201 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 ETV5P41161 510 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 ETV1P50549 477 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 OCLNQ16625 522 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 KIAA1841Q6NSI8 718 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 REEP3Q6NUK4 255 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 PGBD2Q6P3X8 592 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 CASP12Q6UXS9 341 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 USP30Q70CQ3 517 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 ABI3BPQ7Z7G0 1075 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 GLCCI1Q86VQ1 547 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 SYT14Q8NB59 555 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 CHST14Q8NCH0 376 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 NLGN4YQ8NFZ3 816 aaPredicted RBP12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 OR4D11Q8NGI4 311 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 OR52I1Q8NGK6 324 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 PDXPQ96GD0 296 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 SPNS1Q9H2V7 528 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 TMEM245Q9H330 911 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 CXorf36Q9H7Y0 433 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 DMRT3Q9NQL9 472 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 TMCC3Q9ULS5 477 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 MGAT4BQ9UQ53 548 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 KCNE2Q9Y6J6 123 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 A0A0X1KG70 313 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 OR6C70A6NIJ9 312 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 CATP04040 527 aaKnown RBP12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 CPEP16870 476 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 PDHA2P29803 388 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 WDR5P61964 334 aaKnown RBP12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 CYP4F8P98187 520 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 C1DQ13901 141 aaKnown RBP12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 SLBPQ14493 270 aaKnown RBP eCLIP12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 HEPACAMQ14CZ8 416 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 SYTL3Q4VX76 610 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 PYDC2Q56P42 97 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 Q6ZVL8 140 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 METTL3Q86U44 580 aaKnown RBP12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 NPAS4Q8IUM7 802 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 HORMAD2Q8N7B1 307 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 YIPF7Q8N8F6 280 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 FIBINQ8TAL6 211 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 RAET1EQ8TD07 263 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 SLC38A5Q8WUX1 472 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 POLR2J3Q9H1A7 115 aaKnown RBP12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 FAM83DQ9H4H8 585 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 GULP1Q9UBP9 304 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms