RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 BNIP3LO60238 219 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 DPM1O60762 260 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 LHCGRP22888 699 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 MVDP53602 400 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 BTN1A1Q13410 526 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 KLHL22Q53GT1 634 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 HSDL2Q6YN16 418 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 CERS6Q6ZMG9 384 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 GHDCQ8N2G8 530 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 CLDN22Q8N7P3 220 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 PROKR2Q8NFJ6 384 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 BEST4Q8NFU0 473 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 MRPL9Q9BYD2 267 aaKnown RBP13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 MED28Q9H204 178 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 BEX1Q9HBH7 125 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 GPR52Q9Y2T5 361 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 PDE4DIPQ5VU43 2346 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 LOC105369274A0A096LPK9 316 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 PROM1O43490 865 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 CHP2O43745 196 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 MPZL2O60487 215 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 PRKACAP17612 351 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 ITGALP20701 1170 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 ACRV1P26436 265 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 ZNF81P51508 661 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 XKP51811 444 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 SRP54P61011 504 aaKnown RBP13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 CDK6Q00534 326 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 RPL6Q02878 288 aaKnown RBP13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 TSTA3Q13630 321 aaPredicted RBP13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 GALEQ14376 348 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 SUZ12Q15022 739 aaKnown RBP13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 KIAA1324Q6UXG2 1013 aaKnown RBP13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 RFLNAQ6ZTI6 216 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 KRT74Q7RTS7 529 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 TSPAN33Q86UF1 283 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 OR4N4Q8N0Y3 316 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 LMNTD1Q8N9Z9 388 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 TOR1AIP2Q8NFQ8 470 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 HUS1BQ8NHY5 278 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 MED8Q96G25 268 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 SMAD5Q99717 465 aaKnown RBP13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 TMEM43Q9BTV4 400 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 CTPS2Q9NRF8 586 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 ELF5Q9UKW6 265 aaPredicted RBP13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 EXO1Q9UQ84 846 aaKnown RBP13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 NCKAP1Q9Y2A7 1128 aa13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 RPL36Q9Y3U8 105 aaKnown RBP13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 COL4A4P53420 1690 aaPredicted RBP13.28□□□□□ -0.28
TGFBR3-204ENST00000465892 NLRC5Q86WI3 1866 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 SHISA3A0PJX4 238 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 E7EQ34 232 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 CD160O95971 181 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 OPRD1P41143 372 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 RHOAP61586 193 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 HEPACAMQ14CZ8 416 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 NCF4Q15080 339 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 SLC5A12Q1EHB4 618 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 ATP13A5Q4VNC0 1218 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 GCNT6Q5T4J0 391 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 IL20RBQ6UXL0 311 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 GPR142Q7Z601 462 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 LHFPL3Q86UP9 236 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 CHCHD4Q8N4Q1 142 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 CPA6Q8N4T0 437 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 ZNF655Q8N720 491 aaPredicted RBP13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 OR11H7Q8NGC8 314 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 OR52I1Q8NGK6 324 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 UBTD2Q8WUN7 234 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 WFDC6Q9BQY6 131 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 SLC7A5P2Q9GIP4 190 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 ING4Q9UNL4 249 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 CDH10Q9Y6N8 788 aa13.27□□□□□ -0.28
TGFBR3-204ENST00000465892 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 GLYATL1P3A0A0U1RQE8 302 aa13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 TEX46H3BTG2 121 aa13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 HRGP04196 525 aa13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 BPIP17213 487 aa13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 IDSP22304 550 aa13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 CHI3L1P36222 383 aaPredicted RBP13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 ALDH9A1P49189 494 aa13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 SRP9P49458 86 aaKnown RBP13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 MRPS6P82932 125 aaKnown RBP13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 TEKQ02763 1124 aa13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 C2orf80Q0P641 193 aa13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 ZNF177Q13360 481 aaPredicted RBP13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 TUSC3Q13454 348 aa13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 DOC2AQ14183 400 aa13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 PUM1Q14671 1186 aaKnown RBP eCLIP13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 LRRC73Q5JTD7 316 aa13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 KIAA1841Q6NSI8 718 aa13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 DEF8Q6ZN54 512 aa13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 USP45Q70EL2 814 aa13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 CHMP1BQ7LBR1 199 aa13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 LRRC17Q8N6Y2 441 aa13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 ZBTB44Q8NCP5 570 aa13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 LRR1Q96L50 414 aa13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 SPNS1Q9H2V7 528 aa13.27□□□□□ -0.29
TGFBR3-204ENST00000465892 LINC00862A6NCI5 91 aa13.26□□□□□ -0.29
TGFBR3-204ENST00000465892 H3BNC9 293 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms