RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 SNNO75324 88 aaPredicted RBP19■□□□□ 0.63
PTCD3-206ENST00000465560 SKAP2O75563 359 aaPredicted RBP19■□□□□ 0.63
PTCD3-206ENST00000465560 CELA2AP08217 269 aa19■□□□□ 0.63
PTCD3-206ENST00000465560 PRR35P0CG20 571 aa19■□□□□ 0.63
PTCD3-206ENST00000465560 GSTM5P46439 218 aa19■□□□□ 0.63
PTCD3-206ENST00000465560 SLC26A5P58743 744 aa19■□□□□ 0.63
PTCD3-206ENST00000465560 PPP2R2AP63151 447 aa19■□□□□ 0.63
PTCD3-206ENST00000465560 ID2Q02363 134 aa19■□□□□ 0.63
PTCD3-206ENST00000465560 FOLH1Q04609 750 aa19■□□□□ 0.63
PTCD3-206ENST00000465560 KIAA0040Q15053 153 aa19■□□□□ 0.63
PTCD3-206ENST00000465560 NR6A1Q15406 480 aa19■□□□□ 0.63
PTCD3-206ENST00000465560 BTBD16Q32M84 506 aa19■□□□□ 0.63
PTCD3-206ENST00000465560 XKR7Q5GH72 579 aa19■□□□□ 0.63
PTCD3-206ENST00000465560 DNAJB14Q8TBM8 379 aa19■□□□□ 0.63
PTCD3-206ENST00000465560 THOC3Q96J01 351 aaKnown RBP19■□□□□ 0.63
PTCD3-206ENST00000465560 CCT7Q99832 543 aa19■□□□□ 0.63
PTCD3-206ENST00000465560 FAIM2Q9BWQ8 316 aa19■□□□□ 0.63
PTCD3-206ENST00000465560 MANSC1Q9H8J5 431 aa19■□□□□ 0.63
PTCD3-206ENST00000465560 PNO1Q9NRX1 252 aaKnown RBP19■□□□□ 0.63
PTCD3-206ENST00000465560 THAP1Q9NVV9 213 aa19■□□□□ 0.63
PTCD3-206ENST00000465560 VTI1BQ9UEU0 232 aa19■□□□□ 0.63
PTCD3-206ENST00000465560 PCDHA9Q9Y5H5 950 aa19■□□□□ 0.63
PTCD3-206ENST00000465560 C1orf226A1L170 272 aa18.99■□□□□ 0.63
PTCD3-206ENST00000465560 LSM1O15116 133 aaKnown RBP18.99■□□□□ 0.63
PTCD3-206ENST00000465560 SEC22BO75396 215 aa18.99■□□□□ 0.63
PTCD3-206ENST00000465560 MYO1DO94832 1006 aa18.99■□□□□ 0.63
PTCD3-206ENST00000465560 ANXA4P09525 319 aaPredicted RBP18.99■□□□□ 0.63
PTCD3-206ENST00000465560 RPL14P50914 215 aaKnown RBP18.99■□□□□ 0.63
PTCD3-206ENST00000465560 ZNF763Q0D2J5 394 aa18.99■□□□□ 0.63
PTCD3-206ENST00000465560 BIKQ13323 160 aa18.99■□□□□ 0.63
PTCD3-206ENST00000465560 RAPSNQ13702 412 aa18.99■□□□□ 0.63
PTCD3-206ENST00000465560 ELAVL1Q15717 326 aaKnown RBP18.99■□□□□ 0.63
PTCD3-206ENST00000465560 IRAK1BP1Q5VVH5 260 aa18.99■□□□□ 0.63
PTCD3-206ENST00000465560 TCTN3Q6NUS6 607 aa18.99■□□□□ 0.63
PTCD3-206ENST00000465560 OR4N5Q8IXE1 308 aa18.99■□□□□ 0.63
PTCD3-206ENST00000465560 M1APQ8TC57 530 aa18.99■□□□□ 0.63
PTCD3-206ENST00000465560 UCN3Q969E3 161 aa18.99■□□□□ 0.63
PTCD3-206ENST00000465560 FCRL1Q96LA6 429 aa18.99■□□□□ 0.63
PTCD3-206ENST00000465560 SMAD5Q99717 465 aaKnown RBP18.99■□□□□ 0.63
PTCD3-206ENST00000465560 ZNF552Q9H707 407 aaPredicted RBP18.99■□□□□ 0.63
PTCD3-206ENST00000465560 TP53TG5Q9Y2B4 290 aa18.99■□□□□ 0.63
PTCD3-206ENST00000465560 POLR3HQ9Y535 204 aaPredicted RBP18.99■□□□□ 0.63
PTCD3-206ENST00000465560 PCDHGB7Q9Y5F8 929 aa18.99■□□□□ 0.63
PTCD3-206ENST00000465560 COL6A6A6NMZ7 2263 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 A8MUA0 341 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 KLF11O14901 512 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 PGRMC2O15173 223 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 GPR75O95800 540 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 IFNA16P05015 189 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 PGDP52209 483 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 TAS2R50P59544 299 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 LACTB2Q53H82 288 aaPredicted RBP18.98■□□□□ 0.63
PTCD3-206ENST00000465560 VWA5B1Q5TIE3 1220 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 NOXRED1Q6NXP6 359 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 JMJD6Q6NYC1 403 aaPredicted RBP18.98■□□□□ 0.63
PTCD3-206ENST00000465560 AMER2Q8N7J2 671 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 NFAM1Q8NET5 270 aaPredicted RBP18.98■□□□□ 0.63
PTCD3-206ENST00000465560 C16orf78Q8WTQ4 265 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 SLC39A7Q92504 469 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 C19orf60Q96EN9 201 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 SEMA4CQ9C0C4 833 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 SLC25A18Q9H1K4 315 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 MMP25Q9NPA2 562 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 PFDN4Q9NQP4 134 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 DLGAP4Q9Y2H0 992 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 TMED5Q9Y3A6 229 aa18.98■□□□□ 0.63
PTCD3-206ENST00000465560 MYOCOSA0A1B0GUC4 107 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 WASHC1A8K0Z3 465 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 PDGFAP04085 211 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 ALPPP05187 535 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 IL3P08700 152 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 ITGAMP11215 1152 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 STT3AP46977 705 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 RPL38P63173 70 aaKnown RBP18.97■□□□□ 0.63
PTCD3-206ENST00000465560 PLIN5Q00G26 463 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 OCRLQ01968 901 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 PDCD2Q16342 344 aaPredicted RBP18.97■□□□□ 0.63
PTCD3-206ENST00000465560 SOWAHCQ53LP3 525 aaPredicted RBP18.97■□□□□ 0.63
PTCD3-206ENST00000465560 SLC48A1Q6P1K1 146 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 MMP21Q8N119 569 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 TMEM132CQ8N3T6 1108 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 B3GNT7Q8NFL0 401 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 BRIX1Q8TDN6 353 aaKnown RBP18.97■□□□□ 0.63
PTCD3-206ENST00000465560 PSMF1Q92530 271 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 PPP3R2Q96LZ3 170 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 C3orf30Q96M34 536 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 DGAT2Q96PD7 388 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 PELOQ9BRX2 385 aaKnown RBP18.97■□□□□ 0.63
PTCD3-206ENST00000465560 HEY2Q9UBP5 337 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 RALYQ9UKM9 306 aaKnown RBP18.97■□□□□ 0.63
PTCD3-206ENST00000465560 CES1P1Q9UKY3 287 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 PPIEQ9UNP9 301 aaKnown RBP18.97■□□□□ 0.63
PTCD3-206ENST00000465560 ZNF451Q9Y4E5 1061 aa18.97■□□□□ 0.63
PTCD3-206ENST00000465560 CNTRLQ7Z7A1 2325 aa18.96■□□□□ 0.63
PTCD3-206ENST00000465560 K7EM74 188 aa18.96■□□□□ 0.63
PTCD3-206ENST00000465560 ATP8B1O43520 1251 aa18.96■□□□□ 0.63
PTCD3-206ENST00000465560 JUNP05412 331 aaKnown RBP18.96■□□□□ 0.63
PTCD3-206ENST00000465560 COX7A2P14406 83 aa18.96■□□□□ 0.63
PTCD3-206ENST00000465560 DRD2P14416 443 aa18.96■□□□□ 0.63
PTCD3-206ENST00000465560 ALOX15P16050 662 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms