RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 SPACA9Q96E40 222 aaPredicted RBP15.93■□□□□ 0.14
HMGN1-210ENST00000464078 PTCD3Q96EY7 689 aaKnown RBP15.93■□□□□ 0.14
HMGN1-210ENST00000464078 LRRC46Q96FV0 321 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 CFAP36Q96G28 342 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 TMEM79Q9BSE2 394 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 EXO5Q9H790 373 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 CNOT10Q9H9A5 744 aaKnown RBP15.93■□□□□ 0.14
HMGN1-210ENST00000464078 ZFP64Q9NPA5 681 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 DNAJC11Q9NVH1 559 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 FOXD3Q9UJU5 478 aaPredicted RBP15.93■□□□□ 0.14
HMGN1-210ENST00000464078 ZNF490Q9ULM2 529 aaPredicted RBP15.93■□□□□ 0.14
HMGN1-210ENST00000464078 CHMP2BQ9UQN3 213 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 TEX264Q9Y6I9 313 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 DVL2O14641 736 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 COX7A2P14406 83 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 TNNI3P19429 210 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 IVDP26440 423 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 UQCRC1P31930 480 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 STT3AP46977 705 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 KCNJ2P63252 427 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 ASPHQ12797 758 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 E2F2Q14209 437 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 MORF4L2Q15014 288 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 DAZAP2Q15038 168 aaPredicted RBP15.92■□□□□ 0.14
HMGN1-210ENST00000464078 ZNF793Q6ZN11 406 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 UBE3DQ7Z6J8 389 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 C9orf40Q8IXQ3 194 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 GOT1L1Q8NHS2 421 aaPredicted RBP15.92■□□□□ 0.14
HMGN1-210ENST00000464078 RNASE6Q93091 150 aaKnown RBP15.92■□□□□ 0.14
HMGN1-210ENST00000464078 ANKRD9Q96BM1 317 aaPredicted RBP15.92■□□□□ 0.14
HMGN1-210ENST00000464078 FBXL20Q96IG2 436 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 VPS39Q96JC1 886 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 F2RL3Q96RI0 385 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 MAPKAP1Q9BPZ7 522 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 MCMBPQ9BTE3 642 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 TBCDQ9BTW9 1192 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 MS4A8Q9BY19 250 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 DERL2Q9GZP9 239 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 DMRT3Q9NQL9 472 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 CNIH4Q9P003 139 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 CBLCQ9ULV8 474 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 PPP2R2CQ9Y2T4 447 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 SPACA6W5XKT8 324 aa15.92■□□□□ 0.14
HMGN1-210ENST00000464078 MYOCOSA0A1B0GUC4 107 aa15.91■□□□□ 0.14
HMGN1-210ENST00000464078 CLGNO14967 610 aa15.91■□□□□ 0.14
HMGN1-210ENST00000464078 TAPBPO15533 448 aa15.91■□□□□ 0.14
HMGN1-210ENST00000464078 WISP3O95389 354 aaPredicted RBP15.91■□□□□ 0.14
HMGN1-210ENST00000464078 RFPL3SP0C7P2 107 aa15.91■□□□□ 0.14
HMGN1-210ENST00000464078 CD22P20273 847 aa15.91■□□□□ 0.14
HMGN1-210ENST00000464078 ATP5A1P25705 553 aaKnown RBP15.91■□□□□ 0.14
HMGN1-210ENST00000464078 CEACAM8P31997 349 aaPredicted RBP15.91■□□□□ 0.14
HMGN1-210ENST00000464078 MGAT5Q09328 741 aa15.91■□□□□ 0.14
HMGN1-210ENST00000464078 ILF2Q12905 390 aaKnown RBP15.91■□□□□ 0.14
HMGN1-210ENST00000464078 SNTB1Q13884 538 aaKnown RBP15.91■□□□□ 0.14
HMGN1-210ENST00000464078 DOC2AQ14183 400 aa15.91■□□□□ 0.14
HMGN1-210ENST00000464078 TMEM35AQ53FP2 167 aa15.91■□□□□ 0.14
HMGN1-210ENST00000464078 ACOT4Q8N9L9 421 aa15.91■□□□□ 0.14
HMGN1-210ENST00000464078 NAXEQ8NCW5 288 aa15.91■□□□□ 0.14
HMGN1-210ENST00000464078 SENP5Q96HI0 755 aaPredicted RBP15.91■□□□□ 0.14
HMGN1-210ENST00000464078 CAPZA3Q96KX2 299 aa15.91■□□□□ 0.14
HMGN1-210ENST00000464078 ART5Q96L15 291 aa15.91■□□□□ 0.14
HMGN1-210ENST00000464078 PWWP2AQ96N64 755 aa15.91■□□□□ 0.14
HMGN1-210ENST00000464078 RUNDC3BQ96NL0 473 aa15.91■□□□□ 0.14
HMGN1-210ENST00000464078 RHOJQ9H4E5 214 aa15.91■□□□□ 0.14
HMGN1-210ENST00000464078 GSX1Q9H4S2 264 aaPredicted RBP15.91■□□□□ 0.14
HMGN1-210ENST00000464078 PROK2Q9HC23 129 aa15.91■□□□□ 0.14
HMGN1-210ENST00000464078 ALKBH4Q9NXW9 302 aa15.91■□□□□ 0.14
HMGN1-210ENST00000464078 CHCHD2Q9Y6H1 151 aaPredicted RBP15.91■□□□□ 0.14
HMGN1-210ENST00000464078 DNHD1Q96M86 4753 aa15.91■□□□□ 0.14
HMGN1-210ENST00000464078 MPDZO75970 2070 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 NCF1BA6NI72 391 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-210ENST00000464078 NCF1CA8MVU1 366 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-210ENST00000464078 GOSR1O95249 250 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 RAF1P04049 648 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 FBXO45P0C2W1 286 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 NCF1P14598 390 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-210ENST00000464078 BMP5P22003 454 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 HIST1H1TP22492 207 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-210ENST00000464078 TIMP3P35625 211 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 DGKQP52824 942 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 BIKQ13323 160 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 LAPTM5Q13571 262 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 TBCCQ15814 346 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 PDK4Q16654 411 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 ACSF3Q4G176 576 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-210ENST00000464078 PAGE2BQ5JRK9 111 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 HP1BP3Q5SSJ5 553 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-210ENST00000464078 PRAMEF20Q5VT98 475 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 MAATS1Q7Z4T9 603 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 BIVMQ86UB2 503 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 LACC1Q8IV20 430 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 BBOF1Q8ND07 529 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 OSBPL9Q96SU4 736 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 SLC6A15Q9H2J7 730 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.9■□□□□ 0.14
HMGN1-210ENST00000464078 WWOXQ9NZC7 414 aa15.9■□□□□ 0.14
HMGN1-210ENST00000464078 ZNF629Q9UEG4 869 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-210ENST00000464078 MTRF1LQ9UGC7 380 aaKnown RBP15.9■□□□□ 0.14
HMGN1-210ENST00000464078 FN1P02751 2386 aaKnown RBP15.9■□□□□ 0.14
HMGN1-210ENST00000464078 TLN2Q9Y4G6 2542 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms