RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 FAM173AQ9BQD7 235 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 TP63Q9H3D4 680 aaPredicted RBP13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 RPF2Q9H7B2 306 aaKnown RBP13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 ZDHHC11Q9H8X9 412 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 DMRT3Q9NQL9 472 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 SNX15Q9NRS6 342 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 ZDHHC18Q9NUE0 388 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 COQ3Q9NZJ6 369 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 ANGPTL3Q9Y5C1 460 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 TNPO3Q9Y5L0 923 aaKnown RBP13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 PINLYPA6NC86 204 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 C19orf84I3L1E1 186 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 SAP18O00422 153 aaKnown RBP13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 FGF17O60258 216 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 SH3BGRLO75368 114 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 KLHL2O95198 593 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 IGKV3-11P04433 115 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 SNRPB2P08579 225 aaKnown RBP13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 GFAPP14136 432 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 SSTR2P30874 369 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 KIR3DL1P43629 444 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 PIK3CGP48736 1102 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 RAP1GDS1P52306 607 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 PHEXP78562 749 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 TNFRSF17Q02223 184 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 ID2Q02363 134 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 CKAP4Q07065 602 aaKnown RBP13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 PFKFB4Q16877 469 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 HYAL4Q2M3T9 481 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 PIGGQ5H8A4 983 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 KLC3Q6P597 504 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 CEP128Q6ZU80 1094 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 NCCRP1Q6ZVX7 275 aaPredicted RBP13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 ZNF295-AS1Q8N0V1 137 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 L3MBTL4Q8NA19 623 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 ASB5Q8WWX0 329 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 SDCCAG3Q96C92 435 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 RBM18Q96H35 190 aaKnown RBP13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 SENP5Q96HI0 755 aaPredicted RBP13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 ART5Q96L15 291 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 GPR78Q96P69 363 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 DGAT2Q96PD7 388 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 PELOQ9BRX2 385 aaKnown RBP13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 TTTY12Q9BZ98 90 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 ENKD1Q9H0I2 346 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 ACTR8Q9H981 624 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 PRM3Q9NNZ6 103 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 HRH3Q9Y5N1 445 aa13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.3□□□□□ -0.28
SNRNP40-203ENST00000463988 A0A096LPK6 155 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 OR14I1A6ND48 311 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 PLPP1O14494 284 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 PROM1O43490 865 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 IGHG3P01860 377 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 PHBP35232 272 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 BUD31P41223 144 aaPredicted RBP13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 IRF9Q00978 393 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 PLIN5Q00G26 463 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 PLGLB1Q02325 96 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 TBL3Q12788 808 aaKnown RBP13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 CUL3Q13618 768 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 DDX39BQ13838 428 aaKnown RBP13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 ZNF750Q32MQ0 723 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 MRM1Q6IN84 353 aaKnown RBP13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 MYLK4Q86YV6 388 aaPredicted RBP13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 RELL1Q8IUW5 271 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 OR4N5Q8IXE1 308 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 DND1Q8IYX4 353 aaKnown RBP13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 ST13P4Q8IZP2 240 aaPredicted RBP13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 MARVELD2Q8N4S9 558 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 SLC15A4Q8N697 577 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 C14orf79Q96F83 325 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 FBXL20Q96IG2 436 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 LURAP1Q96LR2 239 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 MTERF1Q99551 399 aaKnown RBP13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 TREX2Q9BQ50 279 aaPredicted RBP13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 SORBS1Q9BX66 1292 aaKnown RBP13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 ZNF717Q9BY31 904 aaPredicted RBP13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 DEFB127Q9H1M4 99 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 ACSS3Q9H6R3 686 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 DDX31Q9H8H2 851 aaKnown RBP13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 IL1RL2Q9HB29 575 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 SACM1LQ9NTJ5 587 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 LYARQ9NX58 379 aaKnown RBP13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 ATG4BQ9Y4P1 393 aa13.29□□□□□ -0.28
SNRNP40-203ENST00000463988 A0A0G2JMM0 328 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 A0A1B0GVC2 190 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 A0A1W2PPB8 328 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 A0A1W2PRS3 328 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 ESYT3A0FGR9 886 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 FAM166BA8MTA8 275 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 KIR3DP1A8MWS1 328 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 FOXE1O00358 373 aaPredicted RBP13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 ZNF354AO60765 605 aaPredicted RBP13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 PDE9AO76083 593 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 GPR75O95800 540 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 ALDOAP04075 364 aaKnown RBP13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 P04436 131 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 ALOX15P16050 662 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms