RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SAT1P21673 171 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 AK4P27144 223 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-204ENST00000463622 PDHA2P29803 388 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 PBLDP30039 288 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-204ENST00000463622 SLC7A1P30825 629 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 CCR7P32248 378 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 TRIM23P36406 574 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 GP5P40197 560 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 MAGEA12P43365 314 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 GPR1P46091 355 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 CD151P48509 253 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 WNT3P56703 355 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 OR1D5P58170 312 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 TUBB4BP68371 445 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 THOC5Q13769 683 aaKnown RBP3.46□□□□□ -1.86
SCFD1-204ENST00000463622 DAZAP2Q15038 168 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-204ENST00000463622 ZKSCAN8Q15776 578 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-204ENST00000463622 KRT71Q3SY84 523 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 CCSMST1Q4G0I0 132 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 FASTKD1Q53R41 847 aaKnown RBP3.46□□□□□ -1.86
SCFD1-204ENST00000463622 ACSBG2Q5FVE4 666 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 DCAF12Q5T6F0 453 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 CES4AQ5XG92 561 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 DUS1LQ6P1R4 473 aaKnown RBP3.46□□□□□ -1.86
SCFD1-204ENST00000463622 CYS1Q717R9 158 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 TRABD2AQ86V40 505 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 EXOC3L1Q86VI1 746 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 SLC26A11Q86WA9 606 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 APLFQ8IW19 511 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-204ENST00000463622 NRSN1Q8IZ57 195 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 CENPLQ8N0S6 344 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-204ENST00000463622 GALNT16Q8N428 558 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 GPATCH11Q8N954 259 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 C9orf106Q8NAJ2 232 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 OR4D9Q8NGE8 314 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 OR56A3Q8NH54 315 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 CD200R1Q8TD46 325 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 KCTD4Q8WVF5 259 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.46□□□□□ -1.86
SCFD1-204ENST00000463622 PEX13Q92968 403 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 TLCD1Q96CP7 247 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 TTC25Q96NG3 672 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 GPR78Q96P69 363 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 FCRL4Q96PJ5 515 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 TEFMQ96QE5 360 aaKnown RBP3.46□□□□□ -1.86
SCFD1-204ENST00000463622 VPS35Q96QK1 796 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 SNX18Q96RF0 628 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 CYTH2Q99418 400 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 GPR21Q99679 349 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 GPR22Q99680 433 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 NUDT22Q9BRQ3 303 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 TMEM109Q9BVC6 243 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 PRSS22Q9GZN4 317 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 OR2AG1Q9H205 316 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 RHOJQ9H4E5 214 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 GPN2Q9H9Y4 310 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-204ENST00000463622 RDH14Q9HBH5 336 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 FBXO8Q9NRD0 319 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 SNX15Q9NRS6 342 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 SACM1LQ9NTJ5 587 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 HAUS2Q9NVX0 235 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 OCIAD1Q9NX40 245 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 SLC39A1Q9NY26 324 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 LGALS13Q9UHV8 139 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 CRLS1Q9UJA2 301 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 GRID1Q9ULK0 1009 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 TMEM184BQ9Y519 407 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-204ENST00000463622 LRP4O75096 1905 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 CELSR1Q9NYQ6 3014 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 ABCA2Q9BZC7 2435 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 AP3B1O00203 1094 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 NDC80O14777 642 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 RASGRF2O14827 1237 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 CHUKO15111 745 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 HNRNPRO43390 633 aaKnown RBP3.45□□□□□ -1.86
SCFD1-204ENST00000463622 TUSC2O75896 110 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 SLC25A14O95258 325 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-204ENST00000463622 CBX6O95503 412 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 TNFP01375 233 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 C2P06681 752 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 TPBGLP0DKB5 382 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 THRAP10827 490 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 PKMP14618 531 aaKnown RBP3.45□□□□□ -1.86
SCFD1-204ENST00000463622 TCN2P20062 427 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 F8A1P23610 371 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 MCM3P25205 808 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 HADHAP40939 763 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 MSH2P43246 934 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 PRLHRP49683 370 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 SUOXP51687 545 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 AGFG1P52594 562 aaKnown RBP3.45□□□□□ -1.86
SCFD1-204ENST00000463622 SUMO3P55854 103 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-204ENST00000463622 TMEM115Q12893 351 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-204ENST00000463622 NFE2L1Q14494 772 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 NFATC4Q14934 902 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 INPP5JQ15735 1006 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-204ENST00000463622 KLHL38Q2WGJ6 581 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 C18orf21Q32NC0 220 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-204ENST00000463622 MAP9Q49MG5 647 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms