RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 ZNF75CPQ92670 426 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-204ENST00000463487 TM4SF18Q96CE8 201 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 TUBGCP3Q96CW5 907 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 C11orf24Q96F05 449 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-204ENST00000463487 RBM18Q96H35 190 aaKnown RBP18.55■□□□□ 0.56
COL9A3-204ENST00000463487 THOC3Q96J01 351 aaKnown RBP18.55■□□□□ 0.56
COL9A3-204ENST00000463487 SORT1Q99523 831 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 EBPLQ9BY08 206 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 TRIM55Q9BYV6 548 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 CCL27Q9Y4X3 112 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 PCDHGB7Q9Y5F8 929 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 PCDHA9Q9Y5H5 950 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 SCN2AQ99250 2005 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 DSPP15924 2871 aaKnown RBP18.54■□□□□ 0.56
COL9A3-204ENST00000463487 IGHV3-20A0A0C4DH32 117 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 GLOD5A6NK44 160 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 DYNC1I1O14576 645 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 ATXN7O15265 892 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-204ENST00000463487 OR10H2O60403 315 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 VPS4BO75351 444 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 CEACAM4O75871 244 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 DNAJB5O75953 348 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 GPR75O95800 540 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 DDX5P17844 614 aaKnown RBP18.54■□□□□ 0.56
COL9A3-204ENST00000463487 TNNI3P19429 210 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 ALDH9A1P49189 494 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 PGDP52209 483 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 RPL38P63173 70 aaKnown RBP18.54■□□□□ 0.56
COL9A3-204ENST00000463487 RAE1P78406 368 aaKnown RBP18.54■□□□□ 0.56
COL9A3-204ENST00000463487 MAD2L1Q13257 205 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-204ENST00000463487 XKR7Q5GH72 579 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 C6orf163Q5TEZ5 329 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 Q6ZSR9 355 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 IKBIPQ70UQ0 350 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 CRLF3Q8IUI8 442 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 OR4K14Q8NGD5 310 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 CDC26Q8NHZ8 85 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 M1APQ8TC57 530 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 IMMP1LQ96LU5 166 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 C20orf27Q9GZN8 174 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 ZNF395Q9H8N7 513 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-204ENST00000463487 VTI1BQ9UEU0 232 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 TEKT2Q9UIF3 430 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 DLGAP4Q9Y2H0 992 aa18.54■□□□□ 0.56
COL9A3-204ENST00000463487 POLR3HQ9Y535 204 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-204ENST00000463487 TRPC5OSA6NMA1 111 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 FGF17O60258 216 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 PRR35P0CG20 571 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 ALOX15P16050 662 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-204ENST00000463487 STT3AP46977 705 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 SLC26A5P58743 744 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 VWA5B1Q5TIE3 1220 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 AGAP7PQ5VUJ5 663 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 SLC48A1Q6P1K1 146 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 HPS6Q86YV9 775 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 OR2T11Q8NH01 316 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 OR14A16Q8NHC5 309 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 DNAJB14Q8TBM8 379 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 C16orf78Q8WTQ4 265 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 TM9SF4Q92544 642 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 ANKRD9Q96BM1 317 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-204ENST00000463487 ART5Q96L15 291 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 AGAP4Q96P64 663 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 MESP1Q9BRJ9 268 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 MMP25Q9NPA2 562 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 MYNNQ9NPC7 610 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 MIEF1Q9NQG6 463 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 GIMAP4Q9NUV9 329 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 EHD3Q9NZN3 535 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 ZNF451Q9Y4E5 1061 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 ZNF780BQ9Y6R6 833 aa18.53■□□□□ 0.56
COL9A3-204ENST00000463487 ATP6AP2A0A1C7CYW4 349 aa18.52■□□□□ 0.56
COL9A3-204ENST00000463487 A8MUA0 341 aa18.52■□□□□ 0.56
COL9A3-204ENST00000463487 PEX11AO75192 247 aa18.52■□□□□ 0.56
COL9A3-204ENST00000463487 PRKRAO75569 313 aaKnown RBP18.52■□□□□ 0.56
COL9A3-204ENST00000463487 ATP6AP2O75787 350 aa18.52■□□□□ 0.56
COL9A3-204ENST00000463487 IL3P08700 152 aa18.52■□□□□ 0.56
COL9A3-204ENST00000463487 ASMTP46597 345 aa18.52■□□□□ 0.56
COL9A3-204ENST00000463487 IGLV3-21P80748 117 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-204ENST00000463487 OCRLQ01968 901 aa18.52■□□□□ 0.56
COL9A3-204ENST00000463487 ID2Q02363 134 aa18.52■□□□□ 0.56
COL9A3-204ENST00000463487 KIAA0040Q15053 153 aa18.52■□□□□ 0.56
COL9A3-204ENST00000463487 SMU1Q2TAY7 513 aa18.52■□□□□ 0.56
COL9A3-204ENST00000463487 TCTN3Q6NUS6 607 aa18.52■□□□□ 0.56
COL9A3-204ENST00000463487 ATG14Q6ZNE5 492 aa18.52■□□□□ 0.56
COL9A3-204ENST00000463487 ST13P4Q8IZP2 240 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-204ENST00000463487 FNDC5Q8NAU1 212 aa18.52■□□□□ 0.56
COL9A3-204ENST00000463487 B3GNT7Q8NFL0 401 aa18.52■□□□□ 0.56
COL9A3-204ENST00000463487 FDCSPQ8NFU4 85 aa18.52■□□□□ 0.56
COL9A3-204ENST00000463487 KLHL29Q96CT2 875 aa18.52■□□□□ 0.56
COL9A3-204ENST00000463487 ABHD17AQ96GS6 310 aa18.52■□□□□ 0.56
COL9A3-204ENST00000463487 WDR77Q9BQA1 342 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-204ENST00000463487 COPS7AQ9UBW8 275 aa18.52■□□□□ 0.56
COL9A3-204ENST00000463487 PGRMC2O15173 223 aa18.51■□□□□ 0.55
COL9A3-204ENST00000463487 HDAC3O15379 428 aa18.51■□□□□ 0.55
COL9A3-204ENST00000463487 SLC35E2P0CK97 266 aa18.51■□□□□ 0.55
COL9A3-204ENST00000463487 GALNSP34059 522 aa18.51■□□□□ 0.55
COL9A3-204ENST00000463487 C2orf80Q0P641 193 aa18.51■□□□□ 0.55
COL9A3-204ENST00000463487 LACTB2Q53H82 288 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-204ENST00000463487 CRB2Q5IJ48 1285 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms