RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 NR2F6P10588 404 aa16.51■□□□□ 0.23
VPS52-214ENST00000463486 AP2B1P63010 937 aa16.51■□□□□ 0.23
VPS52-214ENST00000463486 STX4Q12846 297 aa16.51■□□□□ 0.23
VPS52-214ENST00000463486 SERTAD2Q14140 314 aa16.51■□□□□ 0.23
VPS52-214ENST00000463486 IRAK1BP1Q5VVH5 260 aa16.51■□□□□ 0.23
VPS52-214ENST00000463486 RNF165Q6ZSG1 346 aa16.51■□□□□ 0.23
VPS52-214ENST00000463486 PAGE2Q7Z2X7 111 aa16.51■□□□□ 0.23
VPS52-214ENST00000463486 ZNF605Q86T29 641 aa16.51■□□□□ 0.23
VPS52-214ENST00000463486 CRLF3Q8IUI8 442 aa16.51■□□□□ 0.23
VPS52-214ENST00000463486 MMP21Q8N119 569 aa16.51■□□□□ 0.23
VPS52-214ENST00000463486 HAS2Q92819 552 aa16.51■□□□□ 0.23
VPS52-214ENST00000463486 PNPLA2Q96AD5 504 aa16.51■□□□□ 0.23
VPS52-214ENST00000463486 PKNOX2Q96KN3 472 aa16.51■□□□□ 0.23
VPS52-214ENST00000463486 NMRK1Q9NWW6 199 aa16.51■□□□□ 0.23
VPS52-214ENST00000463486 PLA2G3Q9NZ20 509 aa16.51■□□□□ 0.23
VPS52-214ENST00000463486 PTGDR2Q9Y5Y4 395 aa16.51■□□□□ 0.23
VPS52-214ENST00000463486 RP1L1Q8IWN7 2480 aaPredicted RBP16.5■□□□□ 0.23
VPS52-214ENST00000463486 SYNDIG1LA6NDD5 238 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 TMEM200CA6NKL6 621 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 A8MUI8 341 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 TMEM233B4DJY2 109 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 AZIN1O14977 448 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 TM9SF1O15321 606 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 MYZAPP0CAP1 466 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 PLA2G2AP14555 144 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 TLX1P31314 330 aaPredicted RBP16.5■□□□□ 0.23
VPS52-214ENST00000463486 BUD31P41223 144 aaPredicted RBP16.5■□□□□ 0.23
VPS52-214ENST00000463486 STT3AP46977 705 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 ASPHQ12797 758 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 ACER2Q5QJU3 275 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 NDUFAF5Q5TEU4 345 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 KANK2Q63ZY3 851 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 FCRLBQ6BAA4 426 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 Q6ZSR9 355 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 ZADH2Q8N4Q0 377 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 CATSPER1Q8NEC5 780 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.5■□□□□ 0.23
VPS52-214ENST00000463486 TM9SF4Q92544 642 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 RNF32Q9H0A6 362 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 KCNK13Q9HB14 408 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 STMN3Q9NZ72 180 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 MCM8Q9UJA3 840 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 B3GNT3Q9Y2A9 372 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 PCDHA9Q9Y5H5 950 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 DNAJC15Q9Y5T4 150 aa16.5■□□□□ 0.23
VPS52-214ENST00000463486 BIRC5O15392 142 aa16.49■□□□□ 0.23
VPS52-214ENST00000463486 SLC28A2O43868 658 aa16.49■□□□□ 0.23
VPS52-214ENST00000463486 PRKNO60260 465 aaPredicted RBP16.49■□□□□ 0.23
VPS52-214ENST00000463486 WDPCPO95876 746 aa16.49■□□□□ 0.23
VPS52-214ENST00000463486 PRPH2P23942 346 aa16.49■□□□□ 0.23
VPS52-214ENST00000463486 SERPINB5P36952 375 aa16.49■□□□□ 0.23
VPS52-214ENST00000463486 MAPK12P53778 367 aa16.49■□□□□ 0.23
VPS52-214ENST00000463486 WDR4P57081 412 aaKnown RBP16.49■□□□□ 0.23
VPS52-214ENST00000463486 TRA2BP62995 288 aaKnown RBP16.49■□□□□ 0.23
VPS52-214ENST00000463486 KIAA0040Q15053 153 aa16.49■□□□□ 0.23
VPS52-214ENST00000463486 NUDCD3Q8IVD9 361 aa16.49■□□□□ 0.23
VPS52-214ENST00000463486 TMEM132CQ8N3T6 1108 aa16.49■□□□□ 0.23
VPS52-214ENST00000463486 ZNF321PQ8N8H1 164 aa16.49■□□□□ 0.23
VPS52-214ENST00000463486 NCLNQ969V3 563 aa16.49■□□□□ 0.23
VPS52-214ENST00000463486 PPWD1Q96BP3 646 aaKnown RBP16.49■□□□□ 0.23
VPS52-214ENST00000463486 ZNF395Q9H8N7 513 aaPredicted RBP16.49■□□□□ 0.23
VPS52-214ENST00000463486 TRAF6Q9Y4K3 522 aa16.49■□□□□ 0.23
VPS52-214ENST00000463486 HEMK1Q9Y5R4 338 aaPredicted RBP16.49■□□□□ 0.23
VPS52-214ENST00000463486 C17orf105B2RV13 164 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 HRKO00198 91 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 ITM2AO43736 263 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 ZWINTO95229 277 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 IGKV3-11P04433 115 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 IFNA16P05015 189 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 TNFSF10P50591 281 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 SLC18A1P54219 525 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 BIKQ13323 160 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 SPIN4Q56A73 249 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 OR52E8Q6IFG1 317 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 SLC48A1Q6P1K1 146 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 PRICKLE2Q7Z3G6 844 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 RPS19BP1Q86WX3 136 aaKnown RBP16.48■□□□□ 0.23
VPS52-214ENST00000463486 ST13P4Q8IZP2 240 aaPredicted RBP16.48■□□□□ 0.23
VPS52-214ENST00000463486 LGI4Q8N135 537 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 MORN4Q8NDC4 146 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 OR2T11Q8NH01 316 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 OR14A16Q8NHC5 309 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 ZNF721Q8TF20 911 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 ARL8AQ96BM9 186 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 ZNF354BQ96LW1 612 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 C20orf27Q9GZN8 174 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 EPS8L2Q9H6S3 715 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 LUZP4Q9P127 313 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 HEY2Q9UBP5 337 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 ZDHHC2Q9UIJ5 367 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 PCDHGA10Q9Y5H3 936 aa16.48■□□□□ 0.23
VPS52-214ENST00000463486 ARHGAP10A1A4S6 786 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 WDR91A4D1P6 747 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 RSL1D1O76021 490 aaKnown RBP16.47■□□□□ 0.23
VPS52-214ENST00000463486 SLC35E2P0CK97 266 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 ALOX15P16050 662 aaPredicted RBP16.47■□□□□ 0.23
VPS52-214ENST00000463486 TIA1P31483 386 aaKnown RBP eCLIP16.47■□□□□ 0.23
VPS52-214ENST00000463486 SOX18P35713 384 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 ST13P50502 369 aaKnown RBP16.47■□□□□ 0.23
VPS52-214ENST00000463486 MLLT10P55197 1068 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms