RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 PTPMT1Q8WUK0 201 aaPredicted RBP11.06□□□□□ -0.64
RTCB-202ENST00000463455 ITLN2Q8WWU7 325 aaPredicted RBP11.06□□□□□ -0.64
RTCB-202ENST00000463455 ANKRD9Q96BM1 317 aaPredicted RBP11.06□□□□□ -0.64
RTCB-202ENST00000463455 MRRFQ96E11 262 aaKnown RBP11.06□□□□□ -0.64
RTCB-202ENST00000463455 CCDC120Q96HB5 630 aa11.06□□□□□ -0.64
RTCB-202ENST00000463455 SGCZQ96LD1 299 aa11.06□□□□□ -0.64
RTCB-202ENST00000463455 MRPL57Q9BQC6 102 aaKnown RBP11.06□□□□□ -0.64
RTCB-202ENST00000463455 VPS11Q9H270 941 aa11.06□□□□□ -0.64
RTCB-202ENST00000463455 OR51B5Q9H339 312 aa11.06□□□□□ -0.64
RTCB-202ENST00000463455 DDX31Q9H8H2 851 aaKnown RBP11.06□□□□□ -0.64
RTCB-202ENST00000463455 IPPKQ9H8X2 491 aa11.06□□□□□ -0.64
RTCB-202ENST00000463455 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.06□□□□□ -0.64
RTCB-202ENST00000463455 HPF1Q9NWY4 346 aa11.06□□□□□ -0.64
RTCB-202ENST00000463455 PCNX1Q96RV3 2341 aa11.06□□□□□ -0.64
RTCB-202ENST00000463455 GTF3C1Q12789 2109 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 TMEM200CA6NKL6 621 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 C17orf105B2RV13 164 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 NPIPA5E9PKD4 350 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 RTCAO00442 366 aaKnown RBP11.05□□□□□ -0.64
RTCB-202ENST00000463455 HNRNPRO43390 633 aaKnown RBP11.05□□□□□ -0.64
RTCB-202ENST00000463455 SMIM24O75264 130 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 ECHS1P30084 290 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 GALNSP34059 522 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 MEOX1P50221 254 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 CCNG1P51959 295 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 SLAMF1Q13291 335 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 MPEG1Q2M385 716 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 HIST2H2BCQ6DN03 193 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 MRM1Q6IN84 353 aaKnown RBP11.05□□□□□ -0.64
RTCB-202ENST00000463455 OPN5Q6U736 354 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 RGS9BPQ6ZS82 235 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 MYLK4Q86YV6 388 aaPredicted RBP11.05□□□□□ -0.64
RTCB-202ENST00000463455 TICAM1Q8IUC6 712 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 SULF2Q8IWU5 870 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 DND1Q8IYX4 353 aaKnown RBP11.05□□□□□ -0.64
RTCB-202ENST00000463455 ST13P4Q8IZP2 240 aaPredicted RBP11.05□□□□□ -0.64
RTCB-202ENST00000463455 CPSF7Q8N684 471 aaKnown RBP11.05□□□□□ -0.64
RTCB-202ENST00000463455 CEP112Q8N8E3 955 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 PSD4Q8NDX1 1056 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 MYRIPQ8NFW9 859 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 KIF18AQ8NI77 898 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 SLC2A12Q8TD20 617 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 ASB15Q8WXK1 588 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 IFT81Q8WYA0 676 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 ZNF592Q92610 1267 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 MTBPQ96DY7 904 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 RBM18Q96H35 190 aaKnown RBP11.05□□□□□ -0.64
RTCB-202ENST00000463455 DGAT2Q96PD7 388 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 RASL10BQ96S79 203 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 MTERF1Q99551 399 aaKnown RBP11.05□□□□□ -0.64
RTCB-202ENST00000463455 SERPINI1Q99574 410 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 C1QTNF3Q9BXJ4 246 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 ZNF717Q9BY31 904 aaPredicted RBP11.05□□□□□ -0.64
RTCB-202ENST00000463455 ALG2Q9H553 416 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 RUBCNLQ9H714 662 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 RPF2Q9H7B2 306 aaKnown RBP11.05□□□□□ -0.64
RTCB-202ENST00000463455 WDR41Q9HAD4 459 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 CHST11Q9NPF2 352 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 CPSF2Q9P2I0 782 aaKnown RBP11.05□□□□□ -0.64
RTCB-202ENST00000463455 ADAM29Q9UKF5 820 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 NPIPA1Q9UND3 350 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 ERVK-11Q9UQG0 969 aa11.05□□□□□ -0.64
RTCB-202ENST00000463455 NCOA6Q14686 2063 aaPredicted RBP11.05□□□□□ -0.64
RTCB-202ENST00000463455 CACNA1DQ01668 2161 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 A0A0A6YYD5 115 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 TFECO14948 347 aaPredicted RBP11.04□□□□□ -0.64
RTCB-202ENST00000463455 PROM1O43490 865 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 PEX1O43933 1283 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 FGF17O60258 216 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 PRKNO60260 465 aaPredicted RBP11.04□□□□□ -0.64
RTCB-202ENST00000463455 LDB3O75112 727 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 OR2J2O76002 312 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 IGKV3-11P04433 115 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 SNRPAP09012 282 aaKnown RBP11.04□□□□□ -0.64
RTCB-202ENST00000463455 ESRRAP11474 423 aaPredicted RBP11.04□□□□□ -0.64
RTCB-202ENST00000463455 ABOP16442 354 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 TNNI3P19429 210 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 BSGP35613 385 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 SMSP52788 366 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 HK2P52789 917 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 RPS13P62277 151 aaKnown RBP11.04□□□□□ -0.64
RTCB-202ENST00000463455 RNF4P78317 190 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 DDX39BQ13838 428 aaKnown RBP11.04□□□□□ -0.64
RTCB-202ENST00000463455 C3AR1Q16581 482 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 CPSF6Q16630 551 aaKnown RBP eCLIP11.04□□□□□ -0.64
RTCB-202ENST00000463455 SPRED3Q2MJR0 410 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 FRG2Q64ET8 278 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 RTL4Q6ZR62 310 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 TRMT10CQ7L0Y3 403 aaKnown RBP11.04□□□□□ -0.64
RTCB-202ENST00000463455 NUDT13Q86X67 352 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 PLD6Q8N2A8 252 aaKnown RBP11.04□□□□□ -0.64
RTCB-202ENST00000463455 SLC15A4Q8N697 577 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 PTGR2Q8N8N7 351 aaPredicted RBP11.04□□□□□ -0.64
RTCB-202ENST00000463455 ZNF721Q8TF20 911 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 ATP6V1E2Q96A05 226 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 FBXL20Q96IG2 436 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 FRG2BQ96QU4 278 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 OR8D2Q9GZM6 311 aa11.04□□□□□ -0.64
RTCB-202ENST00000463455 MRPL46Q9H2W6 279 aaKnown RBP11.04□□□□□ -0.64
RTCB-202ENST00000463455 XPR1Q9UBH6 696 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms