RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 KRT4P19013 534 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 IMPDH1P20839 514 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 TPP2P29144 1249 aaPredicted RBP14.34□□□□□ -0.11
VARS-219ENST00000461328 BSGP35613 385 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 KRT6CP48668 564 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 TDGF1P3P51864 188 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 KCNK10P57789 538 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 PLIN5Q00G26 463 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 PMP22Q01453 160 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 LCP2Q13094 533 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 C4orf17Q53FE4 359 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 CFAP157Q5JU67 520 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 WDR93Q6P2C0 686 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 GFRALQ6UXV0 394 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 OR4N5Q8IXE1 308 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 RIBC1Q8N443 379 aaPredicted RBP14.34□□□□□ -0.11
VARS-219ENST00000461328 TMEM178AQ8NBL3 297 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 APCDD1LQ8NCL9 501 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 C7orf57Q8NEG2 295 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 MYRIPQ8NFW9 859 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 AENQ8WTP8 325 aaKnown RBP14.34□□□□□ -0.11
VARS-219ENST00000461328 SREK1Q8WXA9 508 aaKnown RBP14.34□□□□□ -0.11
VARS-219ENST00000461328 TANKQ92844 425 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 L3HYPDHQ96EM0 354 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 HBEGFQ99075 208 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 ZNF717Q9BY31 904 aaPredicted RBP14.34□□□□□ -0.11
VARS-219ENST00000461328 MRPL1Q9BYD6 325 aaKnown RBP14.34□□□□□ -0.11
VARS-219ENST00000461328 HES7Q9BYE0 225 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 OR8D2Q9GZM6 311 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 DDX31Q9H8H2 851 aaKnown RBP14.34□□□□□ -0.11
VARS-219ENST00000461328 LRFN1Q9P244 771 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 EMCNQ9ULC0 261 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 GRID1Q9ULK0 1009 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 PCDHGB6Q9Y5F9 930 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 UTP20O75691 2785 aaKnown RBP14.34□□□□□ -0.11
VARS-219ENST00000461328 HIVEP3Q5T1R4 2406 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 CCDC151A5D8V7 595 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 WIPF3A6NGB9 483 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 GLOD5A6NK44 160 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 CDK2AP1O14519 115 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 LRRTM2O43300 516 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 OR10H2O60403 315 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 PLIN3O60664 434 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 CRCPO75575 148 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 ZFAND5O76080 213 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 AIFM1O95831 613 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 PROCP04070 461 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 KLK1P06870 262 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 NUDT17P0C025 328 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 MST1P26927 711 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 CRHR1P34998 444 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 CYB561P49447 251 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 PKNOX1P55347 436 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 PER3P56645 1201 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 MLF1P58340 268 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 FOLH1Q04609 750 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 SRSF11Q05519 484 aaKnown RBP14.33□□□□□ -0.12
VARS-219ENST00000461328 ERCC6LQ2NKX8 1250 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 TCHHL1Q5QJ38 904 aaPredicted RBP14.33□□□□□ -0.12
VARS-219ENST00000461328 CCNYL2Q5T2Q4 361 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 FAM98AQ8NCA5 519 aaKnown RBP14.33□□□□□ -0.12
VARS-219ENST00000461328 MORN4Q8NDC4 146 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 RDH11Q8TC12 318 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 METTL6Q8TCB7 284 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 CAVIN3Q969G5 261 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 ANKRD9Q96BM1 317 aaPredicted RBP14.33□□□□□ -0.12
VARS-219ENST00000461328 SCMH1Q96GD3 660 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 BRF2Q9HAW0 419 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 NMRK1Q9NWW6 199 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 COPS7AQ9UBW8 275 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 SEC14L3Q9UDX4 400 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 VTI1BQ9UEU0 232 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 MID2Q9UJV3 735 aa14.33□□□□□ -0.12
VARS-219ENST00000461328 SPTAN1Q13813 2472 aaKnown RBP14.32□□□□□ -0.12
VARS-219ENST00000461328 A0A1W2PR48 441 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 G3V2L1 256 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 MANBAO00462 879 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 PROM1O43490 865 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 NEURL1O76050 574 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 UNC5CO95185 931 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 ENO1P06733 434 aaKnown RBP14.32□□□□□ -0.12
VARS-219ENST00000461328 SP1P08047 785 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 STSP08842 583 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 ALOX15P16050 662 aaPredicted RBP14.32□□□□□ -0.12
VARS-219ENST00000461328 MAPK12P53778 367 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 MAPKAPK3Q16644 382 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 ZNF468Q5VIY5 522 aaPredicted RBP14.32□□□□□ -0.12
VARS-219ENST00000461328 FAM219BQ5XKK7 198 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 HIST2H2BCQ6DN03 193 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 OR52E8Q6IFG1 317 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 MRM1Q6IN84 353 aaKnown RBP14.32□□□□□ -0.12
VARS-219ENST00000461328 SLC25A25Q6KCM7 469 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 HSDL2Q6YN16 418 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 COMMD6Q7Z4G1 85 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 GALNTL5Q7Z4T8 443 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 TMEM156Q8N614 296 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 SLC2A12Q8TD20 617 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 PTPMT1Q8WUK0 201 aaPredicted RBP14.32□□□□□ -0.12
VARS-219ENST00000461328 TMEM125Q96AQ2 219 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 RBM18Q96H35 190 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms