RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 SPIDRQ14159 915 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 PROX2Q3B8N5 592 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 TMEM71Q6P5X7 295 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 ZZZ3Q8IYH5 903 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 SAMD14Q8IZD0 417 aaPredicted RBP23.05■■□□□ 1.28
U2AF1-204ENST00000459639 CA13Q8N1Q1 262 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 FIG4Q92562 907 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 CSF3RQ99062 836 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 ZNF768Q9H5H4 540 aaKnown RBP23.05■■□□□ 1.28
U2AF1-204ENST00000459639 ACSL6Q9UKU0 697 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 RAB23Q9ULC3 237 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 AP4S1Q9Y587 144 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 SNX8Q9Y5X2 465 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 ZNF780BQ9Y6R6 833 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 DHRS12A0PJE2 317 aa23.04■■□□□ 1.28
U2AF1-204ENST00000459639 HYKKA2RU49 373 aa23.04■■□□□ 1.28
U2AF1-204ENST00000459639 KHNYNO15037 678 aaKnown RBP23.04■■□□□ 1.28
U2AF1-204ENST00000459639 DNAJB6O75190 326 aa23.04■■□□□ 1.28
U2AF1-204ENST00000459639 MSL3P1P0C860 447 aa23.04■■□□□ 1.28
U2AF1-204ENST00000459639 ZNF883P0CG24 379 aa23.04■■□□□ 1.28
U2AF1-204ENST00000459639 CKMT1AP12532 417 aa23.04■■□□□ 1.28
U2AF1-204ENST00000459639 PSMA4P25789 261 aaKnown RBP23.04■■□□□ 1.28
U2AF1-204ENST00000459639 SEPHS1P49903 392 aa23.04■■□□□ 1.28
U2AF1-204ENST00000459639 CDK9P50750 372 aaKnown RBP23.04■■□□□ 1.28
U2AF1-204ENST00000459639 VMACQ2NL98 169 aa23.04■■□□□ 1.28
U2AF1-204ENST00000459639 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.04■■□□□ 1.28
U2AF1-204ENST00000459639 ANGPTL8Q6UXH0 198 aa23.04■■□□□ 1.28
U2AF1-204ENST00000459639 RNF111Q6ZNA4 994 aa23.04■■□□□ 1.28
U2AF1-204ENST00000459639 OR5AK3PQ8NH89 298 aa23.04■■□□□ 1.28
U2AF1-204ENST00000459639 ZNF681Q96N22 645 aa23.04■■□□□ 1.28
U2AF1-204ENST00000459639 EFHD1Q9BUP0 239 aa23.04■■□□□ 1.28
U2AF1-204ENST00000459639 SMOC1Q9H4F8 434 aa23.04■■□□□ 1.28
U2AF1-204ENST00000459639 CCM2LQ9NUG4 571 aaPredicted RBP23.04■■□□□ 1.28
U2AF1-204ENST00000459639 IRAK4Q9NWZ3 460 aa23.04■■□□□ 1.28
U2AF1-204ENST00000459639 C6orf203Q9P0P8 240 aaPredicted RBP23.04■■□□□ 1.28
U2AF1-204ENST00000459639 SGK494L7N484 410 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 PTDSS1P48651 473 aaKnown RBP23.03■■□□□ 1.28
U2AF1-204ENST00000459639 RAB38P57729 211 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 GRM7Q14831 915 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 SNAP47Q5SQN1 464 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 TMTC4Q5T4D3 741 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 SAXO2Q658L1 398 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 LRRC74BQ6ZQY2 392 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 PTOV1Q86YD1 416 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 PQLC1Q8N2U9 271 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 TTC29Q8NA56 475 aaPredicted RBP23.03■■□□□ 1.28
U2AF1-204ENST00000459639 OR9A4Q8NGU2 314 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 SUN3Q8TAQ9 357 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 CANT1Q8WVQ1 401 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 SLCO4A1Q96BD0 722 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 NEURL3Q96EH8 262 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 DPYSL5Q9BPU6 564 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 DPH2Q9BQC3 489 aaPredicted RBP23.03■■□□□ 1.28
U2AF1-204ENST00000459639 GPATCH2Q9NW75 528 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 FAM86C2PA6NEL3 165 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 RDH16O75452 317 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 NSA2O95478 260 aaKnown RBP23.03■■□□□ 1.28
U2AF1-204ENST00000459639 CPNE6O95741 557 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 NELFEP18615 380 aaKnown RBP23.03■■□□□ 1.28
U2AF1-204ENST00000459639 MPIP34949 423 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 GPC1P35052 558 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 DUSP3P51452 185 aaPredicted RBP23.03■■□□□ 1.28
U2AF1-204ENST00000459639 KCNAB1Q14722 419 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 PLA2G2CQ5R387 149 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 TMEM64Q6YI46 380 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 ADGRG5Q8IZF4 528 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 OR5T3Q8NGG3 340 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 POP5Q969H6 163 aaKnown RBP23.03■■□□□ 1.28
U2AF1-204ENST00000459639 NCLNQ969V3 563 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 CLK4Q9HAZ1 481 aaKnown RBP23.03■■□□□ 1.28
U2AF1-204ENST00000459639 SEMA3GQ9NS98 782 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 ARMC1Q9NVT9 282 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 R4GN57 208 aa23.03■■□□□ 1.28
U2AF1-204ENST00000459639 H3BMH7 237 aa23.02■■□□□ 1.28
U2AF1-204ENST00000459639 CYR61O00622 381 aa23.02■■□□□ 1.28
U2AF1-204ENST00000459639 FOXS1O43638 330 aa23.02■■□□□ 1.28
U2AF1-204ENST00000459639 CREG1O75629 220 aa23.02■■□□□ 1.28
U2AF1-204ENST00000459639 MED26O95402 600 aa23.02■■□□□ 1.28
U2AF1-204ENST00000459639 RPLP0P05388 317 aaKnown RBP23.02■■□□□ 1.28
U2AF1-204ENST00000459639 RETP07949 1114 aa23.02■■□□□ 1.28
U2AF1-204ENST00000459639 ANKRD34CP0C6C1 535 aa23.02■■□□□ 1.28
U2AF1-204ENST00000459639 CRATP43155 626 aa23.02■■□□□ 1.28
U2AF1-204ENST00000459639 CCL7P80098 99 aa23.02■■□□□ 1.28
U2AF1-204ENST00000459639 SHC2P98077 582 aa23.02■■□□□ 1.28
U2AF1-204ENST00000459639 DAB2P98082 770 aa23.02■■□□□ 1.28
U2AF1-204ENST00000459639 ADRM1Q16186 407 aa23.02■■□□□ 1.28
U2AF1-204ENST00000459639 SPDYE7PQ495Y7 208 aa23.02■■□□□ 1.28
U2AF1-204ENST00000459639 OR4K14Q8NGD5 310 aa23.02■■□□□ 1.28
U2AF1-204ENST00000459639 SFXN5Q8TD22 340 aa23.02■■□□□ 1.28
U2AF1-204ENST00000459639 FAM162AQ96A26 154 aa23.02■■□□□ 1.28
U2AF1-204ENST00000459639 SPRTNQ9H040 489 aaPredicted RBP23.02■■□□□ 1.28
U2AF1-204ENST00000459639 LRRN3Q9H3W5 708 aa23.02■■□□□ 1.28
U2AF1-204ENST00000459639 PCDHGB2Q9Y5G2 931 aa23.02■■□□□ 1.28
U2AF1-204ENST00000459639 LAMA1P25391 3075 aa23.02■■□□□ 1.28
U2AF1-204ENST00000459639 A0A0A6YYC8 382 aaPredicted RBP23.01■■□□□ 1.27
U2AF1-204ENST00000459639 A0A1W2PQM1 296 aa23.01■■□□□ 1.27
U2AF1-204ENST00000459639 I3L1I5 382 aaPredicted RBP23.01■■□□□ 1.27
U2AF1-204ENST00000459639 TNFRSF21O75509 655 aa23.01■■□□□ 1.27
U2AF1-204ENST00000459639 FEN1P39748 380 aaKnown RBP23.01■■□□□ 1.27
U2AF1-204ENST00000459639 SIM1P81133 766 aaPredicted RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms