RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 NRGNQ92686 78 aa14.61□□□□□ -0.07
CHCHD3-204ENST00000457942 RGMAQ96B86 450 aa14.61□□□□□ -0.07
CHCHD3-204ENST00000457942 MTERF1Q99551 399 aaKnown RBP14.61□□□□□ -0.07
CHCHD3-204ENST00000457942 VKORC1Q9BQB6 163 aa14.61□□□□□ -0.07
CHCHD3-204ENST00000457942 COQ3Q9NZJ6 369 aa14.61□□□□□ -0.07
CHCHD3-204ENST00000457942 ADGRE2Q9UHX3 823 aa14.61□□□□□ -0.07
CHCHD3-204ENST00000457942 PHF11Q9UIL8 331 aa14.61□□□□□ -0.07
CHCHD3-204ENST00000457942 A0A096LPK6 155 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 FGF17O60258 216 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 C2P06681 752 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 CD1EP15812 388 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 HOXB4P17483 251 aaPredicted RBP14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 TYK2P29597 1187 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 TLX1P31314 330 aaPredicted RBP14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 PPIAP62937 165 aaKnown RBP14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 RNF4P78317 190 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 PLIN5Q00G26 463 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 GUCY2DQ02846 1103 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 SETDB1Q15047 1291 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 CMPK2Q5EBM0 449 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 ARHGAP11AQ6P4F7 1023 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 PAOXQ6QHF9 649 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 RTL4Q6ZR62 310 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 FGD2Q7Z6J4 655 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 C7orf57Q8NEG2 295 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 RHEBL1Q8TAI7 183 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 FAM57AQ8TBR7 257 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 CA5BP1Q8WTZ4 195 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 PHF10Q8WUB8 498 aaKnown RBP14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 SDCCAG3Q96C92 435 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 REPS1Q96D71 796 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 DEFB127Q9H1M4 99 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 VPS11Q9H270 941 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 DMRT3Q9NQL9 472 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 MS4A12Q9NXJ0 267 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 MTRF1LQ9UGC7 380 aaKnown RBP14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 PCDHGA11Q9Y5H2 935 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 EML6Q6ZMW3 1958 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 MAP1AP78559 2803 aaPredicted RBP14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 FBN3Q75N90 2809 aa14.6□□□□□ -0.07
CHCHD3-204ENST00000457942 TMEM200CA6NKL6 621 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 SCELO95171 688 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 BUD31P41223 144 aaPredicted RBP14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 ALDH18A1P54886 795 aaKnown RBP14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 RPS13P62277 151 aaKnown RBP14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 TNFRSF17Q02223 184 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 GTF2H2Q13888 395 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 E2F2Q14209 437 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 ACAP2Q15057 778 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 ZNF750Q32MQ0 723 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 DEPDC1Q5TB30 811 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 LIPJQ5W064 366 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 GTF2H2CQ6P1K8 395 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 CYP20A1Q6UW02 462 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 GK5Q6ZS86 529 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 CEP128Q6ZU80 1094 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 FAM47EQ6ZV65 393 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 ZNF572Q7Z3I7 529 aaPredicted RBP14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 GPR180Q86V85 440 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 SLC22A16Q86VW1 577 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 TMEM200AQ86VY9 491 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 CHERPQ8IWX8 916 aaKnown RBP14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 OR2M7Q8NG81 312 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 OR52N2Q8NGI0 321 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 C16orf52Q8NHV5 167 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 ATP6V1E2Q96A05 226 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 ANKRD9Q96BM1 317 aaPredicted RBP14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 RBM18Q96H35 190 aaKnown RBP14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 RPF2Q9H7B2 306 aaKnown RBP14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 DEPPQ9NTK1 212 aa14.59□□□□□ -0.07
CHCHD3-204ENST00000457942 ZNF407Q9C0G0 2248 aa14.58□□□□□ -0.07
CHCHD3-204ENST00000457942 ANKHD1Q8IWZ3 2542 aaKnown RBP14.58□□□□□ -0.07
CHCHD3-204ENST00000457942 A0A0G2JMM0 328 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 A0A1W2PPB8 328 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 A0A1W2PRS3 328 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 KIR3DP1A8MWS1 328 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 PLPP1O14494 284 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 OR10H2O60403 315 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 KLHL2O95198 593 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 ETHE1O95571 254 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 P04436 131 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 MTHFD2P13995 350 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 CD99P14209 185 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 PIK3CBP42338 1070 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 STT3AP46977 705 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 PIK3CGP48736 1102 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 FOLH1Q04609 750 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 ASPHQ12797 758 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 CPSF6Q16630 551 aaKnown RBP eCLIP14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 OPN5Q6U736 354 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 TAOK1Q7L7X3 1001 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 GOLGA7Q7Z5G4 137 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 OR8K3Q8NH51 312 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 SLC22A8Q8TCC7 542 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 PPWD1Q96BP3 646 aaKnown RBP14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 SCYL1Q96KG9 808 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 ART5Q96L15 291 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 GAL3ST4Q96RP7 486 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 DMRTA2Q96SC8 542 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 SPOCK3Q9BQ16 436 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms